| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is 218551667
Identifier: 218551667
GI number: 218551667
Start: 4545510
End: 4546253
Strand: Direct
Name: 218551667
Synonym: EFER_4461
Alternate gene names: NA
Gene position: 4545510-4546253 (Clockwise)
Preceding gene: 218551666
Following gene: 218551668
Centisome position: 99.06
GC content: 59.14
Gene sequence:
>744_bases ATGACAGAGACAGAATCAGCGATTCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGCGGCTTCGTGGTGAGAAC GCCGGAAGGGGAAAGATATTTTCCCTGCGTGAATATCTCCGGTGAGCCGGAGGAGTATTTCCGGATGTCGCCGGAGGACT GGCTGCGGGCAGAGATGCAGGGTGAGATTGTGGCGCTGGTCCACAGCCACCCCGGTGGTCTGCCCTGGCTGAGTGAGGCT GACCGGCGGCTGCAGGTGCAGAGTGATTTGCCGTGGTGGCTGGTCTGCCGGGGTGAGATTCATAAATTCCGCTGTGTGCC GCATCTCACCGGGCGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGCTTACCATCTGGCGTGGA TTGAGATGCCGGATTTTCATCGTGAGGATGACTGGTGGCGTCACGGTCAGAATCTCTATCTGGATAATCTGGAGGCAACT GGGTTATATCAGGTGCCGTTGTCAGCGGCGCAGCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCA TGCCGCTATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACGAGAGAGGTATACCGACA AATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCACGCATCTGCCTTTACGGGGATTTGCAACGATTTG GCCGCCGCATCGACCTTCGTGTGA
Upstream 100 bases:
>100_bases AGGATAAATGCAGCAAATGCCTGAGTGGCTGTAAGTTCCGCAATAATGTCGGCAACTTTGGCGGCTTCCTTTCCATTAAC AAACTTTCGCAGTAAATCCC
Downstream 100 bases:
>100_bases AAACGGGGGCCGAAGCCATCCGGGCGCTGGCCACACAGCTCCCGGCGTTTCGTCAGAAACTGAATGAGGGCTGGTATCAG GTGCGCATTGCCGGGCGTGA
Product: tail fiber component K of prophage
Products: NA
Alternate protein names: Tail Assembly Protein; Tail Assembly Protein K; Phage Minor Tail Protein; Phage Tail Assembly Protein; Prophage LambdaSo Tail Assembly Protein K; Phage Protein; Gifsy-2 Prophage Tail Assembly Protein; Phage-Related Tail Assembly Protein K; Tail Assembly Protein K-Like; Tail Fiber Component; NlpC/P60 Family Protein; Bacteriophage Tail Protein; Tail Fiber Component K Of Prophage; Phage Tail Protein; Metal-Dependent Protease; Tail Fiber Component K
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEEYFRMSPEDWLRAEMQGEIVALVHSHPGGLPWLSEA DRRLQVQSDLPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAWIEMPDFHREDDWWRHGQNLYLDNLEAT GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHRAWHASAFTGICNDL AAASTFV
Sequences:
>Translated_247_residues MTETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEEYFRMSPEDWLRAEMQGEIVALVHSHPGGLPWLSEA DRRLQVQSDLPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAWIEMPDFHREDDWWRHGQNLYLDNLEAT GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHRAWHASAFTGICNDL AAASTFV >Mature_246_residues TETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEEYFRMSPEDWLRAEMQGEIVALVHSHPGGLPWLSEAD RRLQVQSDLPWWLVCRGEIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAWIEMPDFHREDDWWRHGQNLYLDNLEATG LYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHRAWHASAFTGICNDLA AASTFV
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28502; Mature: 28371
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEEYFRMSPEDWLRAEMQ CCCCHHHHHHHHHHCCCHHHCCEEEECCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHC GEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGEIHKFRCVPHLTGRRFEHGVTD CCEEEEEECCCCCCCCHHHHCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCHHCCHHH CYTLFRDAYHLAWIEMPDFHREDDWWRHGQNLYLDNLEATGLYQVPLSAAQPGDVLLCCF HHHHHHHHHHEEEEECCCCCCCCHHHHCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEE GSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHRAWHASAFTGICNDL CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAASTFV HHHHCCC >Mature Secondary Structure TETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPEEYFRMSPEDWLRAEMQ CCCHHHHHHHHHHCCCHHHCCEEEECCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHC GEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGEIHKFRCVPHLTGRRFEHGVTD CCEEEEEECCCCCCCCHHHHCCEEEECCCCCEEEEEECCCEEEEECCCCCCCCHHCCHHH CYTLFRDAYHLAWIEMPDFHREDDWWRHGQNLYLDNLEATGLYQVPLSAAQPGDVLLCCF HHHHHHHHHHEEEEECCCCCCCCHHHHCCCCEEEECCCCCEEEECCCCCCCCCCEEEEEE GSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHRAWHASAFTGICNDL CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAASTFV HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA