Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

Click here to switch to the map view.

The map label for this gene is yjfL [H]

Identifier: 218551454

GI number: 218551454

Start: 4345331

End: 4345729

Strand: Direct

Name: yjfL [H]

Synonym: EFER_4237

Alternate gene names: 218551454

Gene position: 4345331-4345729 (Clockwise)

Preceding gene: 218551453

Following gene: 218551455

Centisome position: 94.7

GC content: 39.6

Gene sequence:

>399_bases
ATGCATATACTGGAATCATTACTGGCTTTTTGTTCATACTTTTTTATTGGCATAGCTATGGTGATCTGCTTTCTCTTTAT
CTATTCCAAAATCACACCACATAATGAGTGGCAATTAATTAAAAATAATAATACGGCAGCAGCACTAGCTTTTGGAGGAA
CATTGCTGGGCTATGTTATTCCATTATCCAGTGCGGCAATTAATGCAGTAAGTGTCCCGGATTATTTTGCCTGGGGTGGA
ATTGCATTGGTTGTTCAACTATTGATATATGGCGGTGTCAGGTTATATATGCCGGCACTAAGTGAAAAAATCATTAATCA
TAATACGGCAGCGGGAATGTTTATGGGCACCGCTGCGTTAGCTGGCGGTATTTTTAATGCTGCCTGCATGACATGGTAA

Upstream 100 bases:

>100_bases
GCGATCACGGGGAGCCAGAATGGATATTTTCTCGCGCCCTGGGCGTTGATATTCCTCTGACGTCTCTTAATATTATTGGC
TAATTTCAGGGAAGTTTACG

Downstream 100 bases:

>100_bases
TGGATGATCATGGCTAAAAAACGCAAATCTACAAAAGGCAATAATACACTCAAACATGCCACCGCCAGCCGTATCAATCG
GCCAGCAGGTGCCACGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MHILESLLAFCSYFFIGIAMVICFLFIYSKITPHNEWQLIKNNNTAAALAFGGTLLGYVIPLSSAAINAVSVPDYFAWGG
IALVVQLLIYGGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW

Sequences:

>Translated_132_residues
MHILESLLAFCSYFFIGIAMVICFLFIYSKITPHNEWQLIKNNNTAAALAFGGTLLGYVIPLSSAAINAVSVPDYFAWGG
IALVVQLLIYGGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW
>Mature_132_residues
MHILESLLAFCSYFFIGIAMVICFLFIYSKITPHNEWQLIKNNNTAAALAFGGTLLGYVIPLSSAAINAVSVPDYFAWGG
IALVVQLLIYGGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

Organism=Escherichia coli, GI1790627, Length=132, Percent_Identity=90.9090909090909, Blast_Score=248, Evalue=7e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 14216; Mature: 14216

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILESLLAFCSYFFIGIAMVICFLFIYSKITPHNEWQLIKNNNTAAALAFGGTLLGYVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHH
PLSSAAINAVSVPDYFAWGGIALVVQLLIYGGVRLYMPALSEKIINHNTAAGMFMGTAAL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGGIFNAACMTW
HHHHHHHHHCCC
>Mature Secondary Structure
MHILESLLAFCSYFFIGIAMVICFLFIYSKITPHNEWQLIKNNNTAAALAFGGTLLGYVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHH
PLSSAAINAVSVPDYFAWGGIALVVQLLIYGGVRLYMPALSEKIINHNTAAGMFMGTAAL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGGIFNAACMTW
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]