| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is proP [H]
Identifier: 218551389
GI number: 218551389
Start: 4275863
End: 4277365
Strand: Direct
Name: proP [H]
Synonym: EFER_4170
Alternate gene names: 218551389
Gene position: 4275863-4277365 (Clockwise)
Preceding gene: 218551388
Following gene: 218551400
Centisome position: 93.18
GC content: 49.7
Gene sequence:
>1503_bases ATGCTGAAAAAGAAAAAAGTAAAACCCATTACGCTTCGTGATGTCACGATTATCGATGACGGAAAATTGCGAAAAGCCAT TACCGCAGCCTCGCTGGGTAACGCAATGGAATGGTTCGATTTTGGTGTTTATGGTTTTGTTGCTTACGCATTAGGTAAAG TGTTCTTTCCGGGAGCCGACCCCAGCGTGCAGATGGTTGCCGCACTTGCCACTTTCTCCGTTCCCTTTCTGATTCGACCG CTTGGCGGACTTTTCTTCGGTATGTTGGGCGATAAATATGGTCGCCAGAAGATCCTTGCGATCACCATTGTGATTATGTC GGTCAGTACTTTCTGTATCGGTTTAATTCCTTCCTATGCCTCCATTGGTATTTGGGCGCCGATCCTGTTGCTGCTCTGTA AGATGGCGCAAGGTTTCTCCGTCGGTGGCGAATATACCGGGGCATCGATATTTGTTGCGGAATACTCTCCTGACCGTAAA CGTGGCTTTATGGGCAGCTGGCTGGACTTCGGTTCCATTGCCGGGTTTGTGCTGGGGGCAGGCGTGGTGGTCCTTATTTC GACCATTGTTGGCGAGGAGAATTTCCTCGACTGGGGCTGGCGTATTCCGTTCTTTATCGCTCTGCCGTTAGGGATTATTG GCCTTTACTTGCGTCATGCGCTGGAAGAGACACCCGCGTTCCAGCAACATGTTGAGAAACTGGAGCAGGGCGACCGTGAA GGTTTGCAGGATGGCCCAAAAGTTTCATTTAAAGAGATCGCCACTAAACACTGGCGTAGTTTGCTGGCATGTATTGGTCT GGTGATCGCGACGAACGTCACTTACTACATGTTGCTGACTTACATGCCGAGTTATCTTTCGCATAACCTGCATTACTCGG AAGATCACGGCGTGTTGATTATCATCGCTATTATGATCGGTATGCTGTTTGTGCAGCCAGTGATGGGGCTGCTTAGCGAC CGGTTTGGCCGTCGTCCGTTTGTTATTCTCGGCAGTATTGCGCTGTTTGTGCTGGCGATTCCGGCGTTTATTTTGATTAA TAGTAATATTATCGGCCTGATTTTTGCCGGGCTGTTGATGCTGGCGGTGATCCTCAACTGTTTTACCGGGGTCATGGCCT CCACGCTTCCGGCGATGTTCCCGACGCATATTCGCTACAGTGCACTGGCAGCTGCGTTTAATATTTCGGTATTGATTGCT GGTTTGACACCAACCGCAGCAGCCTGGTTGGTGGAAAGCTCGCATAATTTGATGATGCCAGCGTACTACCTGATGGTGGT GGCGGTGATTGGTTTAATTACTGGCATTACCATGAAAGAGACGGCGAATCGTCCGCTGAAAGGTGCGACACCAGCGGCGT CAGACTTGCAGGAAGCGAAGGAAATTCTTGGTGAGCATTACGATAATATTGAGCAGAAAATCGATGATATCGATCTCGAA ATTGCCGATTTGCAGGCGAAACGTTCTCGCCTGGTGCAGCAACATCCGCGCATAGTGGAGTAA
Upstream 100 bases:
>100_bases GTTTCAACGATTGCACCCTGCAATTCCCGCTTACCGTTAGCGGACGCCACGCTGAGTCATTTGGCGTGTGCGTACTCGGG CTTAGTCTGCGAGGACAGCT
Downstream 100 bases:
>100_bases CCTGACGCGATGCTGCACGCTTAAGGTTCACTTAATCTCCAGGATGCATACTCTCCTCCAGTTCAACGGAGGAGAGTGTC ATGAAAAACCGTGTTTATGA
Product: proline/glycine betaine transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MLKKKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRP LGGLFFGMLGDKYGRQKILAITIVIMSVSTFCIGLIPSYASIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVEKLEQGDRE GLQDGPKVSFKEIATKHWRSLLACIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD RFGRRPFVILGSIALFVLAIPAFILINSNIIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIA GLTPTAAAWLVESSHNLMMPAYYLMVVAVIGLITGITMKETANRPLKGATPAASDLQEAKEILGEHYDNIEQKIDDIDLE IADLQAKRSRLVQQHPRIVE
Sequences:
>Translated_500_residues MLKKKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRP LGGLFFGMLGDKYGRQKILAITIVIMSVSTFCIGLIPSYASIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVEKLEQGDRE GLQDGPKVSFKEIATKHWRSLLACIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD RFGRRPFVILGSIALFVLAIPAFILINSNIIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIA GLTPTAAAWLVESSHNLMMPAYYLMVVAVIGLITGITMKETANRPLKGATPAASDLQEAKEILGEHYDNIEQKIDDIDLE IADLQAKRSRLVQQHPRIVE >Mature_500_residues MLKKKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRP LGGLFFGMLGDKYGRQKILAITIVIMSVSTFCIGLIPSYASIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVEKLEQGDRE GLQDGPKVSFKEIATKHWRSLLACIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD RFGRRPFVILGSIALFVLAIPAFILINSNIIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIA GLTPTAAAWLVESSHNLMMPAYYLMVVAVIGLITGITMKETANRPLKGATPAASDLQEAKEILGEHYDNIEQKIDDIDLE IADLQAKRSRLVQQHPRIVE
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=500, Percent_Identity=95.6, Blast_Score=979, Evalue=0.0, Organism=Escherichia coli, GI1788292, Length=445, Percent_Identity=32.3595505617978, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1789941, Length=452, Percent_Identity=33.1858407079646, Blast_Score=213, Evalue=3e-56, Organism=Escherichia coli, GI1788942, Length=440, Percent_Identity=29.5454545454545, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI87082231, Length=487, Percent_Identity=22.9979466119097, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI87082404, Length=366, Percent_Identity=26.2295081967213, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323512, Length=551, Percent_Identity=23.5934664246824, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 54704; Mature: 54704
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGAD CCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC PSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSVSTFCIGLIPSYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHH GVVVLISTIVGEENFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVEKLEQGDRE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GLQDGPKVSFKEIATKHWRSLLACIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSIALFVLAIPAFILINSNIIGLIFAGLLM HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTAAAWLVESSHNLMMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCCHH AYYLMVVAVIGLITGITMKETANRPLKGATPAASDLQEAKEILGEHYDNIEQKIDDIDLE HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH IADLQAKRSRLVQQHPRIVE HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLKKKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGAD CCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC PSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSVSTFCIGLIPSYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHH GVVVLISTIVGEENFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVEKLEQGDRE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GLQDGPKVSFKEIATKHWRSLLACIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSIALFVLAIPAFILINSNIIGLIFAGLLM HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTAAAWLVESSHNLMMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCCHH AYYLMVVAVIGLITGITMKETANRPLKGATPAASDLQEAKEILGEHYDNIEQKIDDIDLE HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH IADLQAKRSRLVQQHPRIVE HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]