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The map label for this gene is rhaT [H]

Identifier: 218551108

GI number: 218551108

Start: 3957794

End: 3958828

Strand: Direct

Name: rhaT [H]

Synonym: EFER_3864

Alternate gene names: 218551108

Gene position: 3957794-3958828 (Clockwise)

Preceding gene: 218551105

Following gene: 218551111

Centisome position: 86.25

GC content: 51.21

Gene sequence:

>1035_bases
ATGAGCAACGCGATTACGATGGGGATATTGTGGCATTTGATTGGTGCGGCCAGCGCAGCCTGTTTTTACGCCCCGTTCAA
ACAAGTAAAAAAGTGGTCATGGGAAACCATGTGGTCGGTAGGTGGTGTGGTTTCATGGATTATCCTGCCGTGGCTGATCA
GCGCCCTGTTACTACCTGATTTCTGGGCGTATTACAGCTCGTTTAGCCTCTCAACCCTGCTGCCTGTCTTTCTGTTCGGC
GCAATGTGGGGGATTGGCAATATCAATTACGGCCTGACCATGCGCTATCTCGGCATGTCGATGGGGATTGGTATTGCCAT
TGGTATCACGTTGATTGTTGGTACGCTGATGACACCAATTATCAACGGCAATTTCGATGTGCTGATTAACACCGAAGGCG
GACGCATGACGTTGCTCGGCGTTCTGGTGGCGCTGATTGGCGTAGGGATTGTGACCCGCGCCGGGCAGTTAAAAGAGCGC
AAAATGGGCATTAAAGCCGAAGAGTTCAATCTGAAAAAAGGGCTGGTGCTGGCGGTGATGTGCGGCATTTTCTCTGCCGG
GATGTCCTTTGCGATGAACGCCGCAAAACCGATGCATGAAGCCGCTGCCGCACTAGGCGTCGATCCACTGTATGTCGCTC
TGCCAAGCTATGTTGTCATCATGGGCGGTGGCGCAATTATCAACCTCGGTTTCTGTTTTATTCGTCTGGCGAAAGTGAAA
GATTTGTCGCTAAAAGCCGACTTTTCGCTGGCAAAACCGCTCATCATTCAAAACGTATTGCTATCGGCACTTGGCGGTTT
GATGTGGTATCTGCAATTCTTTTTCTATGCCTGGGGACACGCGCGCATTCCGGCACAATATGACTATATCAGTTGGATGC
TGCATATGAGTTTCTACGTGCTGTGCGGTGGAATTGTGGGTCTGGTATTGAAAGAGTGGAAAGATGCCGGACGTCGCCCG
ATTAGCGTACTGAGCCTCGGTTGCGTGGTGATTATCATCGCCGCCAATATCGTGGGTATGGGGATGGCGAGCTAA

Upstream 100 bases:

>100_bases
ATCATCAGCGGCAACAGGCGAAAGGTTAAAGGTATGCACGATTTTTACACTCATCACGTCGGAAGGGTGACACGACGATA
AAAATGATGAGGATTTCAAA

Downstream 100 bases:

>100_bases
ACTTTTTGCGCACTGAGATGACGCCACTGGCTGGGCGTCATCCCGGTTTCGCGAGTAAATACCACTGAAAAGTAGTTACT
GTCTTCAAACCCACACTGCA

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSNAITMGILWHLIGAASAACFYAPFKQVKKWSWETMWSVGGVVSWIILPWLISALLLPDFWAYYSSFSLSTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
DLSLKADFSLAKPLIIQNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWKDAGRRP
ISVLSLGCVVIIIAANIVGMGMAS

Sequences:

>Translated_344_residues
MSNAITMGILWHLIGAASAACFYAPFKQVKKWSWETMWSVGGVVSWIILPWLISALLLPDFWAYYSSFSLSTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
DLSLKADFSLAKPLIIQNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWKDAGRRP
ISVLSLGCVVIIIAANIVGMGMAS
>Mature_343_residues
SNAITMGILWHLIGAASAACFYAPFKQVKKWSWETMWSVGGVVSWIILPWLISALLLPDFWAYYSSFSLSTLLPVFLFGA
MWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERK
MGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVKD
LSLKADFSLAKPLIIQNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWKDAGRRPI
SVLSLGCVVIIIAANIVGMGMAS

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=344, Percent_Identity=95.0581395348837, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 37290; Mature: 37159

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAITMGILWHLIGAASAACFYAPFKQVKKWSWETMWSVGGVVSWIILPWLISALLLPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVM
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
DLSLKADFSLAKPLIIQNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYV
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LCGGIVGLVLKEWKDAGRRPISVLSLGCVVIIIAANIVGMGMAS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNAITMGILWHLIGAASAACFYAPFKQVKKWSWETMWSVGGVVSWIILPWLISALLLPD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVM
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
DLSLKADFSLAKPLIIQNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYV
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LCGGIVGLVLKEWKDAGRRPISVLSLGCVVIIIAANIVGMGMAS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA