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The map label for this gene is ybhJ [H]

Identifier: 218550941

GI number: 218550941

Start: 3755968

End: 3758232

Strand: Direct

Name: ybhJ [H]

Synonym: EFER_3667

Alternate gene names: 218550941

Gene position: 3755968-3758232 (Clockwise)

Preceding gene: 218550940

Following gene: 218550942

Centisome position: 81.85

GC content: 51.96

Gene sequence:

>2265_bases
ATGATTACGCTTTCTGACAGCGGTGTTTACTTACGCAACGGCAATGAGATTATTGATGAGCGCCATGCCCCGGCGACGTT
CAACAAAGAAGAGGCGAAAAAAGGCACCATCGCGTGGTCTATTTTGCAGGCTCACAACACATCGGGTGATATGCGTCGAC
TGAAAATTAAATTCGATGCCCTTACCTCCCACGACATTACCTTTGTCGGCATTATCCAGACGGCGAAAGCCTCTGGCATG
AACTGGTTTCCCGTACCGTACATCCTGACCAACTGCCATAACTCCTTATGTGCAGTAGGCGGCACAATCAATAGCGACGA
CCACATGTTTGGGCTTTCCGCCGCAAAGAAATATGGCGGAACATTTGTGCCACCGCATTTGGCGGTTATCCATCAGTACA
TGCGGGAAATGATGGCTGGCGGCGGCAAAATGATCCTCGGTTCTGACAGTCACACACGCTATGGCGCGCTGGGTACGATG
GCGATTGGCGAAGGTGGCGGTGAACTGGTTAAGCAGCTGCTAAATGACACTTACGATATCGACTACCCGGAAGTGATTGC
CATTCATCTGAGTGGCAAACCGCAACCAGGCGTTGGTCCACACGACGTGGCGCTGGCGATTATTGGTGCAGTATTTGCGA
ATGGCTATGTCAAAAATAAAGTGATGGAATTCGTTGGGCCGGGCATTGCGGAAATGGACACCGACTTCCGCAATAGCGTC
GATGTGATGACCACTGAAACGACCTGCCTGAGTTCAATCTGGCGAACGGATGCTGACACCCACTGTTTCCTGGCGAAACA
TGGCCGCCCGGATGCTTATAAGCGTCTTGATCCTGCTGATATCACCTGGTACGACGGCTGCGTGCAGGTGAATTTAAGCG
CTATTCAGCCGATGATTGCTCTGCCCTTCCATCCGGGCAATGTGTATACCATTAATACACTGAATGAAAACTTAAGCGAT
ATTCTGCATAGTGTCGACCGCGAGGCGAAACAGATTGCCGGAGAAGAAACCTCATTTTCTCTGCTCAAACATATAGAGAA
TGGCAAACTGCGCGTACAACAGGGAATTATCGCGGGCTGTGCTGGTGGTAACTATTCCAACGTCTATGCCGCATCGCAAA
TGCTCCGTGGTAAGCAGTGCGGCAACGATGCCTTCTCACTCGCCGTTTACCCCTCTTCTCAACCCGTCTTTATGGATCTG
GTGAAAAAAGGCGTGATTTCCGATCTGATGGCGTCCGGGGCTGTCATTCGCACCGCATTCTGCGGCCCTTGTTTTGGCGC
AGGCGATACCCCGTGTCACGATGGCATAAGTATTCGCCATACCACGCGTAACTTCCCGAATCGTGAAGGTTCCAAACCCG
GTGTAGGTCAGATGTCTGCCGTGGCGCTGATGGACGCCCGTTCAATTGCAGCAACGGCAGCCAACGGCGGCCTGCTCACT
CCGGCAACCGATCTTCCGCCAGTAGAAATTGCCGAATACGAGTTTGATCCCACCCCTTACCATAGCCGTGTATATATCGG
CACTCATCAGCCAGTCAAAGACGCAGAACTGGTCTATGGTCCGAATATTAAAGACTGGCCAGAGCTTGGCGCACTTACCG
AGCATATTTTGCTTAAAGTTGTGTCGAAAATCATGGACCCGGTGACGACGACCGACGAACTGATCCCCTCTGGTGAAACA
TCGTCATGGCGCTCTAACCCATTGAAACTGGCTGAATTCACGTTATCCCGTCGCGATCCCCAATACGTTACCCGAAGTAA
AGCCGTTCAGGCTCTGGAAAATGCTCGTGTAAATGGGGAAAACGTTGCCGAACTGGCCCCTATTTTTACCCGGATCCACG
CACTGGCTGGTTTCGATACTGTTCGTCCACAAGACGTTGAAATTGGCAGCATGATCTACGCCGTGAAGCCCGGTGATGGC
TCTGCCCGTGAGCAGGCAGCAAGTTGCCAGCGTGTACTCGGCGGCCTGGCGAATATCGCGGAAGAGTACGCCACCAAACG
TTATCGCTCTAACGTCATCAACTGGGGAATGCTGCCCTTCCAGTTAACCGGAGAACCGACCTTTGAACCTGGCGATGCCA
TTTTCGTTCCTTACGTACGTGCAGCCCTGGATGCCGACGCCCTGACCTTCCCGGCTTTTGTCATCCGGCAAAACGGTCAG
CCTGAAGAGATCGAACTGACGATGACTCCACTTACTCAGGATGAACGTGAAATTATTAAGGCTGGCTGCCTGATTAACTA
CAACAAAGCTCGTAACCATAAGTAA

Upstream 100 bases:

>100_bases
GCGTTGCTGTACAGCGTACAGCCAGACGCATCATGGATGGAATGGTTTATATCCGTAGTTAAATCATTCAGTTATAACAG
ATTCGATAAGGAATATTTTA

Downstream 100 bases:

>100_bases
AAAATGGAGTTGTTATGACATTTATCGAAGAGGCTCAGGCGAAATTTGCAGAGTTGATCACCAGCGAACTGGCGCGTATT
GCCACCATGAAACAAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 754; Mature: 754

Protein sequence:

>754_residues
MITLSDSGVYLRNGNEIIDERHAPATFNKEEAKKGTIAWSILQAHNTSGDMRRLKIKFDALTSHDITFVGIIQTAKASGM
NWFPVPYILTNCHNSLCAVGGTINSDDHMFGLSAAKKYGGTFVPPHLAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AIGEGGGELVKQLLNDTYDIDYPEVIAIHLSGKPQPGVGPHDVALAIIGAVFANGYVKNKVMEFVGPGIAEMDTDFRNSV
DVMTTETTCLSSIWRTDADTHCFLAKHGRPDAYKRLDPADITWYDGCVQVNLSAIQPMIALPFHPGNVYTINTLNENLSD
ILHSVDREAKQIAGEETSFSLLKHIENGKLRVQQGIIAGCAGGNYSNVYAASQMLRGKQCGNDAFSLAVYPSSQPVFMDL
VKKGVISDLMASGAVIRTAFCGPCFGAGDTPCHDGISIRHTTRNFPNREGSKPGVGQMSAVALMDARSIAATAANGGLLT
PATDLPPVEIAEYEFDPTPYHSRVYIGTHQPVKDAELVYGPNIKDWPELGALTEHILLKVVSKIMDPVTTTDELIPSGET
SSWRSNPLKLAEFTLSRRDPQYVTRSKAVQALENARVNGENVAELAPIFTRIHALAGFDTVRPQDVEIGSMIYAVKPGDG
SAREQAASCQRVLGGLANIAEEYATKRYRSNVINWGMLPFQLTGEPTFEPGDAIFVPYVRAALDADALTFPAFVIRQNGQ
PEEIELTMTPLTQDEREIIKAGCLINYNKARNHK

Sequences:

>Translated_754_residues
MITLSDSGVYLRNGNEIIDERHAPATFNKEEAKKGTIAWSILQAHNTSGDMRRLKIKFDALTSHDITFVGIIQTAKASGM
NWFPVPYILTNCHNSLCAVGGTINSDDHMFGLSAAKKYGGTFVPPHLAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AIGEGGGELVKQLLNDTYDIDYPEVIAIHLSGKPQPGVGPHDVALAIIGAVFANGYVKNKVMEFVGPGIAEMDTDFRNSV
DVMTTETTCLSSIWRTDADTHCFLAKHGRPDAYKRLDPADITWYDGCVQVNLSAIQPMIALPFHPGNVYTINTLNENLSD
ILHSVDREAKQIAGEETSFSLLKHIENGKLRVQQGIIAGCAGGNYSNVYAASQMLRGKQCGNDAFSLAVYPSSQPVFMDL
VKKGVISDLMASGAVIRTAFCGPCFGAGDTPCHDGISIRHTTRNFPNREGSKPGVGQMSAVALMDARSIAATAANGGLLT
PATDLPPVEIAEYEFDPTPYHSRVYIGTHQPVKDAELVYGPNIKDWPELGALTEHILLKVVSKIMDPVTTTDELIPSGET
SSWRSNPLKLAEFTLSRRDPQYVTRSKAVQALENARVNGENVAELAPIFTRIHALAGFDTVRPQDVEIGSMIYAVKPGDG
SAREQAASCQRVLGGLANIAEEYATKRYRSNVINWGMLPFQLTGEPTFEPGDAIFVPYVRAALDADALTFPAFVIRQNGQ
PEEIELTMTPLTQDEREIIKAGCLINYNKARNHK
>Mature_754_residues
MITLSDSGVYLRNGNEIIDERHAPATFNKEEAKKGTIAWSILQAHNTSGDMRRLKIKFDALTSHDITFVGIIQTAKASGM
NWFPVPYILTNCHNSLCAVGGTINSDDHMFGLSAAKKYGGTFVPPHLAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
AIGEGGGELVKQLLNDTYDIDYPEVIAIHLSGKPQPGVGPHDVALAIIGAVFANGYVKNKVMEFVGPGIAEMDTDFRNSV
DVMTTETTCLSSIWRTDADTHCFLAKHGRPDAYKRLDPADITWYDGCVQVNLSAIQPMIALPFHPGNVYTINTLNENLSD
ILHSVDREAKQIAGEETSFSLLKHIENGKLRVQQGIIAGCAGGNYSNVYAASQMLRGKQCGNDAFSLAVYPSSQPVFMDL
VKKGVISDLMASGAVIRTAFCGPCFGAGDTPCHDGISIRHTTRNFPNREGSKPGVGQMSAVALMDARSIAATAANGGLLT
PATDLPPVEIAEYEFDPTPYHSRVYIGTHQPVKDAELVYGPNIKDWPELGALTEHILLKVVSKIMDPVTTTDELIPSGET
SSWRSNPLKLAEFTLSRRDPQYVTRSKAVQALENARVNGENVAELAPIFTRIHALAGFDTVRPQDVEIGSMIYAVKPGDG
SAREQAASCQRVLGGLANIAEEYATKRYRSNVINWGMLPFQLTGEPTFEPGDAIFVPYVRAALDADALTFPAFVIRQNGQ
PEEIELTMTPLTQDEREIIKAGCLINYNKARNHK

Specific function: Unknown

COG id: COG1048

COG function: function code C; Aconitase A

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family [H]

Homologues:

Organism=Homo sapiens, GI4501867, Length=752, Percent_Identity=23.936170212766, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI8659555, Length=397, Percent_Identity=22.4181360201511, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87081781, Length=752, Percent_Identity=71.4095744680851, Blast_Score=1126, Evalue=0.0,
Organism=Escherichia coli, GI1786259, Length=322, Percent_Identity=24.5341614906832, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI25149337, Length=775, Percent_Identity=24.6451612903226, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI32564738, Length=693, Percent_Identity=25.3968253968254, Blast_Score=112, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI25149342, Length=617, Percent_Identity=23.8249594813614, Blast_Score=91, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323335, Length=749, Percent_Identity=22.5634178905207, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6322261, Length=789, Percent_Identity=23.3206590621039, Blast_Score=120, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6320440, Length=357, Percent_Identity=22.6890756302521, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571643, Length=453, Percent_Identity=23.6203090507726, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281365315, Length=684, Percent_Identity=22.6608187134503, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI17864292, Length=684, Percent_Identity=22.6608187134503, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI161076999, Length=661, Percent_Identity=22.8441754916793, Blast_Score=86, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24645686, Length=678, Percent_Identity=23.8938053097345, Blast_Score=67, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015928
- InterPro:   IPR015932
- InterPro:   IPR015935
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00330 Aconitase; PF00694 Aconitase_C [H]

EC number: NA

Molecular weight: Translated: 81964; Mature: 81964

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLSDSGVYLRNGNEIIDERHAPATFNKEEAKKGTIAWSILQAHNTSGDMRRLKIKFDA
CEEECCCCEEEECCCHHHHCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCEEEEEEEEEE
LTSHDITFVGIIQTAKASGMNWFPVPYILTNCHNSLCAVGGTINSDDHMFGLSAAKKYGG
ECCCCEEEEEEEEHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEHHHHHHCCC
TFVPPHLAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAIGEGGGELVKQLLNDTYDI
CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPEVIAIHLSGKPQPGVGPHDVALAIIGAVFANGYVKNKVMEFVGPGIAEMDTDFRNSV
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCC
DVMTTETTCLSSIWRTDADTHCFLAKHGRPDAYKRLDPADITWYDGCVQVNLSAIQPMIA
EEEEECHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEECCEEEEEHHHHCCEEE
LPFHPGNVYTINTLNENLSDILHSVDREAKQIAGEETSFSLLKHIENGKLRVQQGIIAGC
EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCEEEEE
AGGNYSNVYAASQMLRGKQCGNDAFSLAVYPSSQPVFMDLVKKGVISDLMASGAVIRTAF
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEHHH
CGPCFGAGDTPCHDGISIRHTTRNFPNREGSKPGVGQMSAVALMDARSIAATAANGGLLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEC
PATDLPPVEIAEYEFDPTPYHSRVYIGTHQPVKDAELVYGPNIKDWPELGALTEHILLKV
CCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
VSKIMDPVTTTDELIPSGETSSWRSNPLKLAEFTLSRRDPQYVTRSKAVQALENARVNGE
HHHHHCCCCCCHHHCCCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
NVAELAPIFTRIHALAGFDTVRPQDVEIGSMIYAVKPGDGSAREQAASCQRVLGGLANIA
HHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYATKRYRSNVINWGMLPFQLTGEPTFEPGDAIFVPYVRAALDADALTFPAFVIRQNGQ
HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHCCCHHHCCCCEEECCCC
PEEIELTMTPLTQDEREIIKAGCLINYNKARNHK
CCEEEEEECCCCCHHHHHHHHCCEEEECHHCCCC
>Mature Secondary Structure
MITLSDSGVYLRNGNEIIDERHAPATFNKEEAKKGTIAWSILQAHNTSGDMRRLKIKFDA
CEEECCCCEEEECCCHHHHCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCEEEEEEEEEE
LTSHDITFVGIIQTAKASGMNWFPVPYILTNCHNSLCAVGGTINSDDHMFGLSAAKKYGG
ECCCCEEEEEEEEHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEHHHHHHCCC
TFVPPHLAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAIGEGGGELVKQLLNDTYDI
CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPEVIAIHLSGKPQPGVGPHDVALAIIGAVFANGYVKNKVMEFVGPGIAEMDTDFRNSV
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCC
DVMTTETTCLSSIWRTDADTHCFLAKHGRPDAYKRLDPADITWYDGCVQVNLSAIQPMIA
EEEEECHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEECCEEEEEHHHHCCEEE
LPFHPGNVYTINTLNENLSDILHSVDREAKQIAGEETSFSLLKHIENGKLRVQQGIIAGC
EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCEEEEE
AGGNYSNVYAASQMLRGKQCGNDAFSLAVYPSSQPVFMDLVKKGVISDLMASGAVIRTAF
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEHHH
CGPCFGAGDTPCHDGISIRHTTRNFPNREGSKPGVGQMSAVALMDARSIAATAANGGLLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEC
PATDLPPVEIAEYEFDPTPYHSRVYIGTHQPVKDAELVYGPNIKDWPELGALTEHILLKV
CCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
VSKIMDPVTTTDELIPSGETSSWRSNPLKLAEFTLSRRDPQYVTRSKAVQALENARVNGE
HHHHHCCCCCCHHHCCCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
NVAELAPIFTRIHALAGFDTVRPQDVEIGSMIYAVKPGDGSAREQAASCQRVLGGLANIA
HHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYATKRYRSNVINWGMLPFQLTGEPTFEPGDAIFVPYVRAALDADALTFPAFVIRQNGQ
HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHCCCHHHCCCCEEECCCC
PEEIELTMTPLTQDEREIIKAGCLINYNKARNHK
CCEEEEEECCCCCHHHHHHHHCCEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]