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The map label for this gene is yhjV [H]

Identifier: 218550820

GI number: 218550820

Start: 3614418

End: 3615716

Strand: Direct

Name: yhjV [H]

Synonym: EFER_3535

Alternate gene names: 218550820

Gene position: 3614418-3615716 (Clockwise)

Preceding gene: 218550818

Following gene: 218550830

Centisome position: 78.77

GC content: 38.11

Gene sequence:

>1299_bases
ATGCAGGATAAGGCAGTACCATTAAGCAGTAATACAACTACAACCCGATCATCGTTGAAGAAATTACCCTTCACCAAATA
TGATTTTGGCTGGTTACTATTATGCATTGGTATGGCAATCGGTGCGGGTACGGTATTAATGCCGGTACAAATTGGATTGA
AAGGTGTTTGGGTATTCATTACTGCCGCGATTATTGCTTATCCCGCTACCTATATCGTACAAGAATTATACTTAAAAACC
TTGTCAGAAAGCGAAACATGCAATAACTACACCGATATCATCAGTCATTACCTAGGGAAAAATTGGGGGATTTTTCTTGG
TGTAATTTATTTTTTAATGATTATCCATGGAATATTTATTTATTCTTTATCAGTTATATTTGACAGTGCCTCTTATATAA
AAACATTTGGGCTGGTGGATGCTGATCTGTCGCACTCCATTGTGTATAAAGTGGTAATTTTTTCTCTTCTTGTAGCAATT
GCATCCTGTGGTGAAAAATTACTTTTCAAAATATCCGGTCCAATGGTGGTAGTAAAGGTTGGGATAATCATCATATTTGG
TTGTGCCATGATCCCTTACTGGAATCTGAGTAATATCAGTGCATTTCCTGCCGCTGGTGTATTCTTCCGCGATGTTCTGT
TAACAATTCCATTCTGTTTTTTCTCTGCTGTGTTTATTCAGGTTCTTAATCCGATGAATATAGCCTATCGTAAAAGAGAA
TCAGATCGGGTGCTGGCAACACGTATGGTGATTCGGGCGCACCGCATTAGTTATATTACCCTGATTACGATAATTTTGTT
CTTTTCCTTTTCATTTACTTTTTCTATCAGCCATGAAGAGGCTGTTTCAGCATTTGAGCAAAACATCTCCGCGCTGGCTC
TGGCGGCGCAAGTAATCCCTGGTAATATTATTCATATTACGTCTACAGTGTTGAATGTTTTTGCTGTGTTAACTGCTTTC
TTTGGCATATATCTTGGATTTCATGAGGCGATAAAAGGCATTATTCTTAATTTATTAAGCCGCATCATGGATATAAAGAA
AATTAATTCTCTGCTACTGACAGTAAGCATCTGTATTTTTATCGTGATTACCTTAGTGATTTGGGTATCATTCCGCGTTT
CGGTGTTAGTTTTTTTCCAGTTAGGGAGCCCACTTTATGGTATCGTCGCCTGCCTTATTCCGGTATTCTTGATATACAAC
GTACCGCAACTCAAGAAACTGCGAGGCCTGAAAATTTGGCTTATTTTACTTTACGGTATCCTGCTCTGTTTAACACCTTT
CCTGACTTTTATTGAGTGA

Upstream 100 bases:

>100_bases
CGCAGCACATGCAACTTGAAGCATGACGAGTATTTTTTAAATTTGAAGCATACATGCTCTCTTGTCTCAAAAAGAGCATG
TATTTTAGACAGGGGGCTAT

Downstream 100 bases:

>100_bases
TATTAAATCGCGCCGTCAATCACTGGCGGCGCTGATGCCCTGTTGGTAGCGATGAATTTTATTGAGTACTGTCGTGTGTG
AAACACCTAATGTTTTTGCT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MQDKAVPLSSNTTTTRSSLKKLPFTKYDFGWLLLCIGMAIGAGTVLMPVQIGLKGVWVFITAAIIAYPATYIVQELYLKT
LSESETCNNYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVIFDSASYIKTFGLVDADLSHSIVYKVVIFSLLVAI
ASCGEKLLFKISGPMVVVKVGIIIIFGCAMIPYWNLSNISAFPAAGVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKRE
SDRVLATRMVIRAHRISYITLITIILFFSFSFTFSISHEEAVSAFEQNISALALAAQVIPGNIIHITSTVLNVFAVLTAF
FGIYLGFHEAIKGIILNLLSRIMDIKKINSLLLTVSICIFIVITLVIWVSFRVSVLVFFQLGSPLYGIVACLIPVFLIYN
VPQLKKLRGLKIWLILLYGILLCLTPFLTFIE

Sequences:

>Translated_432_residues
MQDKAVPLSSNTTTTRSSLKKLPFTKYDFGWLLLCIGMAIGAGTVLMPVQIGLKGVWVFITAAIIAYPATYIVQELYLKT
LSESETCNNYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVIFDSASYIKTFGLVDADLSHSIVYKVVIFSLLVAI
ASCGEKLLFKISGPMVVVKVGIIIIFGCAMIPYWNLSNISAFPAAGVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKRE
SDRVLATRMVIRAHRISYITLITIILFFSFSFTFSISHEEAVSAFEQNISALALAAQVIPGNIIHITSTVLNVFAVLTAF
FGIYLGFHEAIKGIILNLLSRIMDIKKINSLLLTVSICIFIVITLVIWVSFRVSVLVFFQLGSPLYGIVACLIPVFLIYN
VPQLKKLRGLKIWLILLYGILLCLTPFLTFIE
>Mature_432_residues
MQDKAVPLSSNTTTTRSSLKKLPFTKYDFGWLLLCIGMAIGAGTVLMPVQIGLKGVWVFITAAIIAYPATYIVQELYLKT
LSESETCNNYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVIFDSASYIKTFGLVDADLSHSIVYKVVIFSLLVAI
ASCGEKLLFKISGPMVVVKVGIIIIFGCAMIPYWNLSNISAFPAAGVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKRE
SDRVLATRMVIRAHRISYITLITIILFFSFSFTFSISHEEAVSAFEQNISALALAAQVIPGNIIHITSTVLNVFAVLTAF
FGIYLGFHEAIKGIILNLLSRIMDIKKINSLLLTVSICIFIVITLVIWVSFRVSVLVFFQLGSPLYGIVACLIPVFLIYN
VPQLKKLRGLKIWLILLYGILLCLTPFLTFIE

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789961, Length=413, Percent_Identity=83.7772397094431, Blast_Score=693, Evalue=0.0,
Organism=Escherichia coli, GI145693183, Length=431, Percent_Identity=44.5475638051044, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1789160, Length=413, Percent_Identity=23.9709443099274, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1789504, Length=424, Percent_Identity=24.7641509433962, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789211, Length=405, Percent_Identity=21.4814814814815, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694
- InterPro:   IPR018227 [H]

Pfam domain/function: PF03222 Trp_Tyr_perm [H]

EC number: NA

Molecular weight: Translated: 48201; Mature: 48201

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]