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The map label for this gene is yfbS [C]

Identifier: 218550516

GI number: 218550516

Start: 3295879

End: 3297189

Strand: Reverse

Name: yfbS [C]

Synonym: EFER_3210

Alternate gene names: 218550516

Gene position: 3297189-3295879 (Counterclockwise)

Preceding gene: 218550517

Following gene: 218550515

Centisome position: 71.85

GC content: 48.05

Gene sequence:

>1311_bases
TTGGATACAATATCATATATCATTGATAGGATAATTATAAATATGGAACCCATTACCATCACCCTATGTTTACTGGTCTT
TGCCATAGCTATGTTTGTGTGGGAAAAAGTGCCGCTGGCGGTCACTTCTATGATCGTTTGTGTTGCGCTGGTCATTACCG
GTGTGCTCAACGTTAAACAGGCTTTTGGCGGTTTTATCGACAATAACGTCATTTTATTTGTTGCGATGTTTATTGTTGGC
GGTGCGCTATTCGAAACCGGAATGGCGAATAAAGTAGGCGGCGTTATCACTCGCTTTGCCAAAACCGAAAAGCAGCTCAT
TTTCACCATCATGCTGGTGACTGGATTGATGTCCGGTGTTCTTTCCAACACCGGAACAGCAGCGGTGTTGATTCCGGTCG
TTATCGGTGTGGCAGCAAAATCAGGTTTTAGTCGCTCACATCTGCTGATGCCACTGGTGTTTGCTGCGGCGCTCGGCGGC
AACTTATCGCTGATTGGTGCGCCGGGTAACCTGATTGCTCAGTCCGCTTTACAGAATATTGGTAGTGGGTTTGGCTTTTT
TGAATACGCCAAAATCGGCCTGCCCATGCTGGCTTGCGGCATTTTTTACTTCCTGACAATTGGCTATAAATTCCTGCCTG
CTAACTCGAATGGTGGTGCGGTTGGTAGCGTGGGCGAGCAACGAGATTACAGCCATATACCACAGTGGAAGCAGATCCTG
TCTATGGTGGTATTGATCGCCACGATCCTTGGCATGATCTTCGAAAAACAGATCGGTATTAGTCTGGCAGTGATCGGTTG
TGTTGGGGCGCTGGTGTTAGTGGTGACAGGTGTCCTGAATGAAAAACAGGCCTATAACGCTATTGATTCGCAGACCATTT
TTATCTTCGGCGGCACGCTGGCGCTGGCAAAAGCACTGGAGATGACAGGTGCTGGCAAACTGGTTGCTGACTATGTCATT
AGCATGTTGGGGCAAAACTCCTCACCTTTTATGTTACTGGTGGCGGTGTTTACCTTATCGGTGATTATGACCAACTTTAT
GTCTAACACTGCGACAACAGCGTTGCTGGTGCCCGTAAGTTTGTCGATTGCAGCTGGAATGGGCGCAGATCCACGTGCTG
TTTTAATGGCAACAGTTATCGGCGGTTCCTGTGCCTACGCCACACCCATTGGTATGCCAGCAAATATGATGGTGCTCTCG
GCTGGCGGCTATAAGTTCATCGACTACGCCAAAGCTGGCATTCCCCTGATTATCGTTTCAACCATTGTCAGCCTGATTTT
GCTGCCAATTCTTTTCCCCTTTCACCCGTAA

Upstream 100 bases:

>100_bases
CCGTTTTCTGACGATCTTGATTTAGATCGCAAAACTGATCCATTTCTTAAAAACGCGTTGACTTCGCCTGGCGCGAGGCA
TAATTTTCGCCCCAACAATA

Downstream 100 bases:

>100_bases
TTAACGCAACTGTCCTTTTCAAGGAGCAATTATGAGCAAAAGCGAACAGATATCCCATATGACCAATATTATGGCCAGGT
TTGTGGGATATACCGGCAAA

Product: charged metabolite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MDTISYIIDRIIINMEPITITLCLLVFAIAMFVWEKVPLAVTSMIVCVALVITGVLNVKQAFGGFIDNNVILFVAMFIVG
GALFETGMANKVGGVITRFAKTEKQLIFTIMLVTGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRSHLLMPLVFAAALGG
NLSLIGAPGNLIAQSALQNIGSGFGFFEYAKIGLPMLACGIFYFLTIGYKFLPANSNGGAVGSVGEQRDYSHIPQWKQIL
SMVVLIATILGMIFEKQIGISLAVIGCVGALVLVVTGVLNEKQAYNAIDSQTIFIFGGTLALAKALEMTGAGKLVADYVI
SMLGQNSSPFMLLVAVFTLSVIMTNFMSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLS
AGGYKFIDYAKAGIPLIIVSTIVSLILLPILFPFHP

Sequences:

>Translated_436_residues
MDTISYIIDRIIINMEPITITLCLLVFAIAMFVWEKVPLAVTSMIVCVALVITGVLNVKQAFGGFIDNNVILFVAMFIVG
GALFETGMANKVGGVITRFAKTEKQLIFTIMLVTGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRSHLLMPLVFAAALGG
NLSLIGAPGNLIAQSALQNIGSGFGFFEYAKIGLPMLACGIFYFLTIGYKFLPANSNGGAVGSVGEQRDYSHIPQWKQIL
SMVVLIATILGMIFEKQIGISLAVIGCVGALVLVVTGVLNEKQAYNAIDSQTIFIFGGTLALAKALEMTGAGKLVADYVI
SMLGQNSSPFMLLVAVFTLSVIMTNFMSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLS
AGGYKFIDYAKAGIPLIIVSTIVSLILLPILFPFHP
>Mature_436_residues
MDTISYIIDRIIINMEPITITLCLLVFAIAMFVWEKVPLAVTSMIVCVALVITGVLNVKQAFGGFIDNNVILFVAMFIVG
GALFETGMANKVGGVITRFAKTEKQLIFTIMLVTGLMSGVLSNTGTAAVLIPVVIGVAAKSGFSRSHLLMPLVFAAALGG
NLSLIGAPGNLIAQSALQNIGSGFGFFEYAKIGLPMLACGIFYFLTIGYKFLPANSNGGAVGSVGEQRDYSHIPQWKQIL
SMVVLIATILGMIFEKQIGISLAVIGCVGALVLVVTGVLNEKQAYNAIDSQTIFIFGGTLALAKALEMTGAGKLVADYVI
SMLGQNSSPFMLLVAVFTLSVIMTNFMSNTATTALLVPVSLSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLS
AGGYKFIDYAKAGIPLIIVSTIVSLILLPILFPFHP

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=190, Percent_Identity=37.3684210526316, Blast_Score=116, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI32565804, Length=438, Percent_Identity=22.8310502283105, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71988385, Length=450, Percent_Identity=22.6666666666667, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 45690; Mature: 45690

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTISYIIDRIIINMEPITITLCLLVFAIAMFVWEKVPLAVTSMIVCVALVITGVLNVKQ
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AFGGFIDNNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQLIFTIMLVTGLMSGV
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNTGTAAVLIPVVIGVAAKSGFSRSHLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNI
HCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
GSGFGFFEYAKIGLPMLACGIFYFLTIGYKFLPANSNGGAVGSVGEQRDYSHIPQWKQIL
CCCCCHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
SMVVLIATILGMIFEKQIGISLAVIGCVGALVLVVTGVLNEKQAYNAIDSQTIFIFGGTL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECHHH
ALAKALEMTGAGKLVADYVISMLGQNSSPFMLLVAVFTLSVIMTNFMSNTATTALLVPVS
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHH
LSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLSAGGYKFIDYAKAGIPLIIVS
HHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHH
TIVSLILLPILFPFHP
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTISYIIDRIIINMEPITITLCLLVFAIAMFVWEKVPLAVTSMIVCVALVITGVLNVKQ
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AFGGFIDNNVILFVAMFIVGGALFETGMANKVGGVITRFAKTEKQLIFTIMLVTGLMSGV
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNTGTAAVLIPVVIGVAAKSGFSRSHLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNI
HCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
GSGFGFFEYAKIGLPMLACGIFYFLTIGYKFLPANSNGGAVGSVGEQRDYSHIPQWKQIL
CCCCCHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
SMVVLIATILGMIFEKQIGISLAVIGCVGALVLVVTGVLNEKQAYNAIDSQTIFIFGGTL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECHHH
ALAKALEMTGAGKLVADYVISMLGQNSSPFMLLVAVFTLSVIMTNFMSNTATTALLVPVS
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHH
LSIAAGMGADPRAVLMATVIGGSCAYATPIGMPANMMVLSAGGYKFIDYAKAGIPLIIVS
HHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHH
TIVSLILLPILFPFHP
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]