Click here to switch to the map view.

The map label for this gene is yrbC [H]

Identifier: 218550475

GI number: 218550475

Start: 3256675

End: 3257310

Strand: Reverse

Name: yrbC [H]

Synonym: EFER_3169

Alternate gene names: 218550475

Gene position: 3257310-3256675 (Counterclockwise)

Preceding gene: 218550476

Following gene: 218550474

Centisome position: 70.99

GC content: 48.27

Gene sequence:

>636_bases
ATGTTCAAACGCTTAATGATGATTGCTCTGCTGGTGATTGCTCCGCTGTCTGCGGCAACCGCAGCGGATCAAACAAATCC
ATATAAATTAATGGATGAGGCGGCGCAAAAAACCTTTGACCGTCTTAAGAATGAGCAGCCTAAAATTCGTGCAAACCCCG
ATTATCTGCGTGAAGTGGTAGATCAGGAACTTCTACCTTATGTGCAGATCAAATACGCAGGTGCTCTGGTGCTGGGGCAG
TACTATAAAAGTGCGACCCCTGCGCAACGCGATGCATTCTTTGCGGCATTTCGTGAATATCTGAAGCAGGCTTATGGTCA
GGCGTTGGCTATGTACCACGGTCAGACCTATCAAATTGCCCCGGAACAGCCATTGGGCGATAAAACAATAGTGCCGATCC
GTGTGACCATTATTGATCCTAACGGTCGTCCGCCAGTGCGCCTTGATTTCCAGTGGCGTAAAAATTCTCAAACGGGTAAC
TGGCAGGCTTATGACATGATCGCCGAAGGTGTCAGCATGATCACCACTAAGCAAAATGAGTGGAGCTCCCTGCTGCGTAC
CAAAGGCGTTGATGGCCTGACAGCACAACTGAAATCACTTTCTCAGCAGAAGATCACGCTGGAAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
AGAGAATAAGAATTCTGGCGATGCGCCAGCGCCAGATGAAGGCAATAATCAAGTCAATGAGCCTGCGGGCGCAACGAAAT
AATCTCAGGAGAATCGACAC

Downstream 100 bases:

>100_bases
TGAGTGAGTCACTGAGCTGGATGCGGATGGGTGACACCCTGGCATTAGCTGGCGAGTTGGATCAGGACGTACTTAACCCA
TTGTGGGAAGAGCGAAATGA

Product: toluene ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFKRLMMIALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPKIRANPDYLREVVDQELLPYVQIKYAGALVLGQ
YYKSATPAQRDAFFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
WQAYDMIAEGVSMITTKQNEWSSLLRTKGVDGLTAQLKSLSQQKITLEEKK

Sequences:

>Translated_211_residues
MFKRLMMIALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPKIRANPDYLREVVDQELLPYVQIKYAGALVLGQ
YYKSATPAQRDAFFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
WQAYDMIAEGVSMITTKQNEWSSLLRTKGVDGLTAQLKSLSQQKITLEEKK
>Mature_211_residues
MFKRLMMIALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPKIRANPDYLREVVDQELLPYVQIKYAGALVLGQ
YYKSATPAQRDAFFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
WQAYDMIAEGVSMITTKQNEWSSLLRTKGVDGLTAQLKSLSQQKITLEEKK

Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family [H]

Homologues:

Organism=Escherichia coli, GI1789583, Length=211, Percent_Identity=94.7867298578199, Blast_Score=421, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023094
- InterPro:   IPR008869 [H]

Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]

EC number: NA

Molecular weight: Translated: 23977; Mature: 23977

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRLMMIALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPKIRANPDYLREVV
CHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DQELLPYVQIKYAGALVLGQYYKSATPAQRDAFFAAFREYLKQAYGQALAMYHGQTYQIA
HHHHCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNE
CCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
WSSLLRTKGVDGLTAQLKSLSQQKITLEEKK
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFKRLMMIALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPKIRANPDYLREVV
CHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DQELLPYVQIKYAGALVLGQYYKSATPAQRDAFFAAFREYLKQAYGQALAMYHGQTYQIA
HHHHCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNE
CCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHH
WSSLLRTKGVDGLTAQLKSLSQQKITLEEKK
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]