| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550406
Identifier: 218550406
GI number: 218550406
Start: 3184995
End: 3185870
Strand: Reverse
Name: 218550406
Synonym: EFER_3098
Alternate gene names: NA
Gene position: 3185870-3184995 (Counterclockwise)
Preceding gene: 218550407
Following gene: 218550405
Centisome position: 69.43
GC content: 48.4
Gene sequence:
>876_bases TTGCCACTGGTTTATAGAGGTGACGCGATGAGTCTTTATTTATCTGCGGCACTGGCCAGTAATCGTAAAGGCCGTTTTTT GCAAACTGTTGCGGGGGCTACTCCCTTAACGAAGGATTGGATTAGCTCGCCGCCAGCCAGTGGTTTGTTAATAGTGCAAG CAGAAGAGTTGACTGACGCTAATACTATGCAGCACCTGTATCACTGGGCTATGCAGGCAGGTTGTGCCGCTTTGGTAATA AACCTGAAAGCTGAACAATTTACCTTATTAGCGCAATTGCCCTCCCCACTGGATTGGCAGTTAGTACCAGCTATCTTGAG GGTGCAGGAACCGGAGCTAACCGCTTTGCTAGCCAGTGAAACAGACCAGGCTATTGCTGGCTTTACTGGCAGTGCAGATC GCCACCAACACCAGGCCGGTGATGTAGTGCATACCCGCTACATACGAAAACACAGCAACAGTGGGCTATTAGCTTTTACC ACGTTACCTTTGTGGTCGCTGACTTTACTCGATCATAGTGAGCTCCTGGTGAGCTGGTTGAATTGGTTTGTGGACCATGC AGGCATTGCTGAACGAATAATCGAACCTAAAGCGCCATCGACTGACTACACGCCAGATAAGCACGATCTGGTTGTATTGC TATTACTCTACGCTGGCGGTGGCATGAGCTTACAAGCGTTGTCTGAGCATAATGCGGTTAAGCTGATGTTTGATGTTAAT AGCCTTGATATTGTCAAGCGGGGTGAGATGTTGCGGCAGCACGATTTTATCGACGACGCGGGCATAACAACTACAGGTAA AACATGCCTACAAACCTCGCAATATTGGGCTTATGCCCCATTACTTAGCGAGCAGCTACACACAGGAATGCTATAA
Upstream 100 bases:
>100_bases CCGATTTATCAGGCTTTGAGCCAAAATCAGGAACCCGTGTTAACACCTGAGCAACAGAAAGGACTTGTAGACAAAGGTAT TCTAAAAATGCGCCTTACCT
Downstream 100 bases:
>100_bases GCATGAATGAGAACAAAACGATGAATTTAGCGCAATCGCTCGCCATCGATAGCCAGCTTCGCTTACCGGGAAGTGCAGGA CGCTTGCTTAAACAGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPLVYRGDAMSLYLSAALASNRKGRFLQTVAGATPLTKDWISSPPASGLLIVQAEELTDANTMQHLYHWAMQAGCAALVI NLKAEQFTLLAQLPSPLDWQLVPAILRVQEPELTALLASETDQAIAGFTGSADRHQHQAGDVVHTRYIRKHSNSGLLAFT TLPLWSLTLLDHSELLVSWLNWFVDHAGIAERIIEPKAPSTDYTPDKHDLVVLLLLYAGGGMSLQALSEHNAVKLMFDVN SLDIVKRGEMLRQHDFIDDAGITTTGKTCLQTSQYWAYAPLLSEQLHTGML
Sequences:
>Translated_291_residues MPLVYRGDAMSLYLSAALASNRKGRFLQTVAGATPLTKDWISSPPASGLLIVQAEELTDANTMQHLYHWAMQAGCAALVI NLKAEQFTLLAQLPSPLDWQLVPAILRVQEPELTALLASETDQAIAGFTGSADRHQHQAGDVVHTRYIRKHSNSGLLAFT TLPLWSLTLLDHSELLVSWLNWFVDHAGIAERIIEPKAPSTDYTPDKHDLVVLLLLYAGGGMSLQALSEHNAVKLMFDVN SLDIVKRGEMLRQHDFIDDAGITTTGKTCLQTSQYWAYAPLLSEQLHTGML >Mature_290_residues PLVYRGDAMSLYLSAALASNRKGRFLQTVAGATPLTKDWISSPPASGLLIVQAEELTDANTMQHLYHWAMQAGCAALVIN LKAEQFTLLAQLPSPLDWQLVPAILRVQEPELTALLASETDQAIAGFTGSADRHQHQAGDVVHTRYIRKHSNSGLLAFTT LPLWSLTLLDHSELLVSWLNWFVDHAGIAERIIEPKAPSTDYTPDKHDLVVLLLLYAGGGMSLQALSEHNAVKLMFDVNS LDIVKRGEMLRQHDFIDDAGITTTGKTCLQTSQYWAYAPLLSEQLHTGML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32051; Mature: 31920
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVYRGDAMSLYLSAALASNRKGRFLQTVAGATPLTKDWISSPPASGLLIVQAEELTDA CCEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCCCEEEEEEHHHCCH NTMQHLYHWAMQAGCAALVINLKAEQFTLLAQLPSPLDWQLVPAILRVQEPELTALLASE HHHHHHHHHHHHHCCEEEEEECCHHHEEEEECCCCCCCHHHHHHHHHCCCCHHEEEECCC TDQAIAGFTGSADRHQHQAGDVVHTRYIRKHSNSGLLAFTTLPLWSLTLLDHSELLVSWL CCHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCHHEEEHHCHHHHHHHHH NWFVDHAGIAERIIEPKAPSTDYTPDKHDLVVLLLLYAGGGMSLQALSEHNAVKLMFDVN HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECC SLDIVKRGEMLRQHDFIDDAGITTTGKTCLQTSQYWAYAPLLSEQLHTGML CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure PLVYRGDAMSLYLSAALASNRKGRFLQTVAGATPLTKDWISSPPASGLLIVQAEELTDA CEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCCCEEEEEEHHHCCH NTMQHLYHWAMQAGCAALVINLKAEQFTLLAQLPSPLDWQLVPAILRVQEPELTALLASE HHHHHHHHHHHHHCCEEEEEECCHHHEEEEECCCCCCCHHHHHHHHHCCCCHHEEEECCC TDQAIAGFTGSADRHQHQAGDVVHTRYIRKHSNSGLLAFTTLPLWSLTLLDHSELLVSWL CCHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCHHEEEHHCHHHHHHHHH NWFVDHAGIAERIIEPKAPSTDYTPDKHDLVVLLLLYAGGGMSLQALSEHNAVKLMFDVN HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECC SLDIVKRGEMLRQHDFIDDAGITTTGKTCLQTSQYWAYAPLLSEQLHTGML CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA