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The map label for this gene is hdeB [H]

Identifier: 218550342

GI number: 218550342

Start: 3106152

End: 3106562

Strand: Reverse

Name: hdeB [H]

Synonym: EFER_3034

Alternate gene names: 218550342

Gene position: 3106562-3106152 (Counterclockwise)

Preceding gene: 218550343

Following gene: 218550341

Centisome position: 67.7

GC content: 43.55

Gene sequence:

>411_bases
ATGGTATTTCGACAGGAGGAGCATCCATGCATATTATGGATACCCTCTTGCCTGGACGTCATTCTTGAACGGATAGGTAA
CGATATGAAAAGTCTGTCTCTGCGTAAAACGCTGGTTTTCCTTGGTGCAGTTGCTGCTCTTTCCCTGGCTAATGCGCAAT
CTGCGCTGGCGGCCAGTGAAATGCCAAAAGATATGAGCTGCCAGGAATTTATCAACCTGAATCCAAAAGCCATGACTCCG
GTTGCCTGGTGGATGTTACACGAAGAAACTGTGTATAAAGGTGGCGATACAGTGACATTAAATGAAACTGATCTCACCCA
AATCCCACAAGTCATTGAGTACTGCAAAAAAAATCCGGAAAAAAATCTGTATACCTTTAAAGAGAAGAATGCCAACGTCT
TACCAAACTAA

Upstream 100 bases:

>100_bases
TTCAGGCATGTACTCAGGACAAAAAAGCCAGCTTTAAAGAAAAAGCACAAGGTGAATGGGCAAAAATTAAGAAAGATCTC
TGATTTAGCCGGAATTAATA

Downstream 100 bases:

>100_bases
GGTAAGCCACCAGAAAAGTCACTGCCTGTCATCAGCGCGGGCAGTTTCTTTTTTGGGCTACAACTTTATATTTTATACAA
CTTACCCAAACCCTTGGTTA

Product: acid-resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MVFRQEEHPCILWIPSCLDVILERIGNDMKSLSLRKTLVFLGAVAALSLANAQSALAASEMPKDMSCQEFINLNPKAMTP
VAWWMLHEETVYKGGDTVTLNETDLTQIPQVIEYCKKNPEKNLYTFKEKNANVLPN

Sequences:

>Translated_136_residues
MVFRQEEHPCILWIPSCLDVILERIGNDMKSLSLRKTLVFLGAVAALSLANAQSALAASEMPKDMSCQEFINLNPKAMTP
VAWWMLHEETVYKGGDTVTLNETDLTQIPQVIEYCKKNPEKNLYTFKEKNANVLPN
>Mature_136_residues
MVFRQEEHPCILWIPSCLDVILERIGNDMKSLSLRKTLVFLGAVAALSLANAQSALAASEMPKDMSCQEFINLNPKAMTP
VAWWMLHEETVYKGGDTVTLNETDLTQIPQVIEYCKKNPEKNLYTFKEKNANVLPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082279, Length=104, Percent_Identity=83.6538461538462, Blast_Score=187, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010486 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15357; Mature: 15357

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFRQEEHPCILWIPSCLDVILERIGNDMKSLSLRKTLVFLGAVAALSLANAQSALAASE
CCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPKDMSCQEFINLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPQVIEYCKKNPE
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC
KNLYTFKEKNANVLPN
CCEEEEECCCCCCCCC
>Mature Secondary Structure
MVFRQEEHPCILWIPSCLDVILERIGNDMKSLSLRKTLVFLGAVAALSLANAQSALAASE
CCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPKDMSCQEFINLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPQVIEYCKKNPE
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC
KNLYTFKEKNANVLPN
CCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]