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The map label for this gene is slp [H]

Identifier: 218550339

GI number: 218550339

Start: 3103820

End: 3104386

Strand: Direct

Name: slp [H]

Synonym: EFER_3031

Alternate gene names: 218550339

Gene position: 3103820-3104386 (Clockwise)

Preceding gene: 218550334

Following gene: 218550340

Centisome position: 67.64

GC content: 42.5

Gene sequence:

>567_bases
ATGAACAAAACAAAAGGTGCGCTTATCATCAGCCTGTCATTATTGCTGGCTGCCTGTAGTTCTATTCCACAGAATATCAA
AGGTAATAACCAACCCGATATCCAGAAAAGTTTCGTTGCTGTCCACAACCAGCCAAATTTATATGTAGGTCAACAGGCTC
GCTTTGGCGGTAAAGTTATAAATGTGATCAACTCCAAAAATGACACATTATTGGAAATTGCCGTTTTACCTTTAGACCGT
TATGCCAAACCTGAACTCGATGCCAACTATCAGGGGCGTATTCTGGCTAAACAGAATGGTTTCCTTGACCCGGTAAACTA
CCGCAATCATTACGTTACCGTGCTGGGCACTATTCAAGGTGAACAACAGGGCTTTATCAACAAAGTTCCTTACGATTTCG
TTAATCTGAATATTCAAGGGATTCAGATTTGGCGCATGGTTGAAACCGTGAATACCACTTACAACTTATGGGATTACGGC
TATGGTGCCTTCTGGCCTGAACCAGGTTGGGGTGCGCCGTATTACGGCGAAAACGTGAGTTCTGTTACTCCGGAATTAAT
TAAATAA

Upstream 100 bases:

>100_bases
AAAATACCACTATCGGCTATTTCGCTCATTAAACTGAGAAATTAACCGAAAAAATCCTATTATTTGCATATCATTTGTTG
ACGTTGAAAAGGACAGTAAC

Downstream 100 bases:

>100_bases
CAGATCATACTCTAAATAATTCGAGTTGCAGGAAGGCGACAAGCGAGTGAATCCCCAGGAGCTTACATAAGTAAGTGACT
GGGGTGAGCGAACGCAGACG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNKTKGALIISLSLLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPNLYVGQQARFGGKVINVINSKNDTLLEIAVLPLDR
YAKPELDANYQGRILAKQNGFLDPVNYRNHYVTVLGTIQGEQQGFINKVPYDFVNLNIQGIQIWRMVETVNTTYNLWDYG
YGAFWPEPGWGAPYYGENVSSVTPELIK

Sequences:

>Translated_188_residues
MNKTKGALIISLSLLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPNLYVGQQARFGGKVINVINSKNDTLLEIAVLPLDR
YAKPELDANYQGRILAKQNGFLDPVNYRNHYVTVLGTIQGEQQGFINKVPYDFVNLNIQGIQIWRMVETVNTTYNLWDYG
YGAFWPEPGWGAPYYGENVSSVTPELIK
>Mature_188_residues
MNKTKGALIISLSLLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPNLYVGQQARFGGKVINVINSKNDTLLEIAVLPLDR
YAKPELDANYQGRILAKQNGFLDPVNYRNHYVTVLGTIQGEQQGFINKVPYDFVNLNIQGIQIWRMVETVNTTYNLWDYG
YGAFWPEPGWGAPYYGENVSSVTPELIK

Specific function: The induction of slp may help to stabilize the outer membrane during carbon starvation and stationary phase [H]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=188, Percent_Identity=82.9787234042553, Blast_Score=333, Evalue=4e-93,
Organism=Escherichia coli, GI1788108, Length=162, Percent_Identity=43.2098765432099, Blast_Score=133, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 21063; Mature: 21063

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTKGALIISLSLLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPNLYVGQQARFGGKVI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCEEECCCCCCCCEEE
NVINSKNDTLLEIAVLPLDRYAKPELDANYQGRILAKQNGFLDPVNYRNHYVTVLGTIQG
EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECC
EQQGFINKVPYDFVNLNIQGIQIWRMVETVNTTYNLWDYGYGAFWPEPGWGAPYYGENVS
CCCCCCCCCCCEEEEEEEEEEEEEEEEHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
SVTPELIK
CCCHHHCC
>Mature Secondary Structure
MNKTKGALIISLSLLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPNLYVGQQARFGGKVI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCEEECCCCCCCCEEE
NVINSKNDTLLEIAVLPLDRYAKPELDANYQGRILAKQNGFLDPVNYRNHYVTVLGTIQG
EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECC
EQQGFINKVPYDFVNLNIQGIQIWRMVETVNTTYNLWDYGYGAFWPEPGWGAPYYGENVS
CCCCCCCCCCCEEEEEEEEEEEEEEEEHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
SVTPELIK
CCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022277; 8041620; 9278503 [H]