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The map label for this gene is 218550335

Identifier: 218550335

GI number: 218550335

Start: 3098261

End: 3099301

Strand: Reverse

Name: 218550335

Synonym: EFER_3027

Alternate gene names: NA

Gene position: 3099301-3098261 (Counterclockwise)

Preceding gene: 218550336

Following gene: 218550332

Centisome position: 67.54

GC content: 41.98

Gene sequence:

>1041_bases
ATGGCCAGCACCGATACCGTAACCCTGATATCATCGGTATTTTCTGCGGATGTGAGACATGTAATCGTCAAATCCGCTAT
AAATACATTGCCTTATGCAACCGTTACGGTGAATACCTCGAGCAGTTTTCATGAAGAGGACGTTGCTGGTACAAATTTAA
CTTTGTCATGCAATCAAATATCTTATGGTGGTTTGGTGACTGAACTTCAGCAAACTGCTTTTAATCAATACCATCTTGTC
GTGCGACCCTGGTTGTGGATGCTGACACACCAGTCCCATAATCGTGTATTTCAGAATCTTACCTATCAGGAGATTATATA
TAAGATATTTGCAGAAAATGGTATTTCAGATTATACCTTTTTGTTTTGTTGTAAGGCGAAAAAACGACCGTTTTGCTTGC
AGTATCAGGAAAGCGATTATCAATTTATTTGCCGCCTGATGGCAGAAGAAAAAGTTTGCTGGTTTTTCCGTTATCAACCC
GGACGGCATATTTTACTGCTGGTACAAGATTATAATGCGTTAACATCTGTTGTGGGTAGCTTTAAGCTTAGCTATTCCAC
TTCCTGTCAGCATGAATTAAATATTATCTATAGCGTTAAAAAAAGTTTTTCTGTTATCAGCAACCCGATTAAAAAATTAA
GCGGTAAAAGTCGCTGTGCGTTATTCCGCTCAGGATCTCGTTTTACCTTAACTCACCATGATAACGGATCATTAAACCGT
GAGTGGTTGCTGACCCGTGTTACCCATATCTTTGATGGTCAGCACTACTACAATCATTTTACTGCCGTCACCAGTGCTAC
TTCTCACGAATCGACAGATTTGCCGTTTCAACCAGCAATCCCGCCACAAATAGCCACGGTCATGGCAGTTAGCGGAGAGG
GCGTAACATTGGCGTTTATATGGGATGGTTGCCCCGCAGAACATACCATGGCGACACTGGCTAACAACTGCAACCTTCCC
CTGACTGCGGGGCAAAAAGTGATAGTCTGCTTTATTGCTGGCGATCCTGATAAACCCTTCATTCTCGCTAAAATTCAATG
A

Upstream 100 bases:

>100_bases
GTCTTCAGATTCGATTGTTATTTGTTGTATGTTGTGTTTTAAATAATAAAGCAGGCAACAGTTAGACGTAATACAATAAG
ATACTCAACGAGAGAAGGCT

Downstream 100 bases:

>100_bases
GTAAACACAACTCGCCGCTGGCGAAAAAGTTGCCGCACGCTAATAATAGCGGCAATGAACAGTGCCGCTGCTCCGCAAAG
TGTGGCATCGACAATGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Rhs Element Vgr Protein; VgrG Protein; Rhs-Family Protein; Rhs Accessory Genetic Element; Rhs Family Protein; RHS Accessory Genetic Element; Rhs Element Vgr Family Protein; Rhs Element Vgr Family; Vgr-Related Protein; Type VI Secretion System VgrG Family Protein; VrgG Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MASTDTVTLISSVFSADVRHVIVKSAINTLPYATVTVNTSSSFHEEDVAGTNLTLSCNQISYGGLVTELQQTAFNQYHLV
VRPWLWMLTHQSHNRVFQNLTYQEIIYKIFAENGISDYTFLFCCKAKKRPFCLQYQESDYQFICRLMAEEKVCWFFRYQP
GRHILLLVQDYNALTSVVGSFKLSYSTSCQHELNIIYSVKKSFSVISNPIKKLSGKSRCALFRSGSRFTLTHHDNGSLNR
EWLLTRVTHIFDGQHYYNHFTAVTSATSHESTDLPFQPAIPPQIATVMAVSGEGVTLAFIWDGCPAEHTMATLANNCNLP
LTAGQKVIVCFIAGDPDKPFILAKIQ

Sequences:

>Translated_346_residues
MASTDTVTLISSVFSADVRHVIVKSAINTLPYATVTVNTSSSFHEEDVAGTNLTLSCNQISYGGLVTELQQTAFNQYHLV
VRPWLWMLTHQSHNRVFQNLTYQEIIYKIFAENGISDYTFLFCCKAKKRPFCLQYQESDYQFICRLMAEEKVCWFFRYQP
GRHILLLVQDYNALTSVVGSFKLSYSTSCQHELNIIYSVKKSFSVISNPIKKLSGKSRCALFRSGSRFTLTHHDNGSLNR
EWLLTRVTHIFDGQHYYNHFTAVTSATSHESTDLPFQPAIPPQIATVMAVSGEGVTLAFIWDGCPAEHTMATLANNCNLP
LTAGQKVIVCFIAGDPDKPFILAKIQ
>Mature_345_residues
ASTDTVTLISSVFSADVRHVIVKSAINTLPYATVTVNTSSSFHEEDVAGTNLTLSCNQISYGGLVTELQQTAFNQYHLVV
RPWLWMLTHQSHNRVFQNLTYQEIIYKIFAENGISDYTFLFCCKAKKRPFCLQYQESDYQFICRLMAEEKVCWFFRYQPG
RHILLLVQDYNALTSVVGSFKLSYSTSCQHELNIIYSVKKSFSVISNPIKKLSGKSRCALFRSGSRFTLTHHDNGSLNRE
WLLTRVTHIFDGQHYYNHFTAVTSATSHESTDLPFQPAIPPQIATVMAVSGEGVTLAFIWDGCPAEHTMATLANNCNLPL
TAGQKVIVCFIAGDPDKPFILAKIQ

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38998; Mature: 38867

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTDTVTLISSVFSADVRHVIVKSAINTLPYATVTVNTSSSFHEEDVAGTNLTLSCNQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHCCCCEEEEEECCE
SYGGLVTELQQTAFNQYHLVVRPWLWMLTHQSHNRVFQNLTYQEIIYKIFAENGISDYTF
ECCHHHHHHHHHHCCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCEEE
LFCCKAKKRPFCLQYQESDYQFICRLMAEEKVCWFFRYQPGRHILLLVQDYNALTSVVGS
EEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHHHHC
FKLSYSTSCQHELNIIYSVKKSFSVISNPIKKLSGKSRCALFRSGSRFTLTHHDNGSLNR
EEEEECCCCCHHEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCH
EWLLTRVTHIFDGQHYYNHFTAVTSATSHESTDLPFQPAIPPQIATVMAVSGEGVTLAFI
HHHHHHHHHHHCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE
WDGCPAEHTMATLANNCNLPLTAGQKVIVCFIAGDPDKPFILAKIQ
ECCCCCHHHHHHHHCCCCCCEECCCEEEEEEEECCCCCCEEEEEEC
>Mature Secondary Structure 
ASTDTVTLISSVFSADVRHVIVKSAINTLPYATVTVNTSSSFHEEDVAGTNLTLSCNQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHCCCCEEEEEECCE
SYGGLVTELQQTAFNQYHLVVRPWLWMLTHQSHNRVFQNLTYQEIIYKIFAENGISDYTF
ECCHHHHHHHHHHCCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCEEE
LFCCKAKKRPFCLQYQESDYQFICRLMAEEKVCWFFRYQPGRHILLLVQDYNALTSVVGS
EEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHHHHC
FKLSYSTSCQHELNIIYSVKKSFSVISNPIKKLSGKSRCALFRSGSRFTLTHHDNGSLNR
EEEEECCCCCHHEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCH
EWLLTRVTHIFDGQHYYNHFTAVTSATSHESTDLPFQPAIPPQIATVMAVSGEGVTLAFI
HHHHHHHHHHHCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE
WDGCPAEHTMATLANNCNLPLTAGQKVIVCFIAGDPDKPFILAKIQ
ECCCCCHHHHHHHHCCCCCCEECCCEEEEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA