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The map label for this gene is yqiH [H]

Identifier: 218550296

GI number: 218550296

Start: 3057224

End: 3057973

Strand: Direct

Name: yqiH [H]

Synonym: EFER_2988

Alternate gene names: 218550296

Gene position: 3057224-3057973 (Clockwise)

Preceding gene: 218550295

Following gene: 218550297

Centisome position: 66.62

GC content: 45.47

Gene sequence:

>750_bases
ATGAATAAAATGAAATCGCTATTAACCGCAACAGGAATGATTTGTTTACTGGGGATCTGCAACTTCGCCCAGGCGACAGT
CTCCCCCGACAGGACGCGCATCATTTTTAATGCTTCGAATAAAAGTGCAACGGTTCGCCTGACCAACCAAAGTAAAATCG
ATCCTTATCTGGCTCAGTCGTGGATTGAGGATGCCAGCGGTAAAAAAACGCGCGATTTCATATCAACGCTTCCCCCAATG
GAGCGTATCGAGGCCAATGAGCAAGTGCAAATTCGCCTTATGGCGTTAGCATCGCTAAATAACTTACCACAAGACAGGGA
AACTGTATTTTATTATAACGTGCGAGAAATTCCGCCGCGCGCCAAAGAACAGAACGTGATGCAAATCGCTATGCAAAGTC
GTCTGAAATTATTCTGGCGCCCAAAGGCTATTGAATTAAAAGATGGTGAGGCAGTTCCAGTTCAGAAAGTGACTGTCGCA
CGTTCAGCTAACGGTCTTACACTCAATAATCCAACCCCTTATCACATCACTGTTGGGTATATCGGAACTAACGGCAAGAC
ATTAATGCCCGGAACAGACAGCATTATGGTTACCCCTTTTGGGACAGCAACTCAGCAAATTAAAAATCTTCCTGCGACCT
TCCTGCTGGGTTTTGTGGGGGATTACGGCGGGCTGGAAATGTTCAAAATTGACTGTAATTCCGTTCAGTCACTCTGCCAA
ACTTCACCTGCGAAAAAGGGGAAATTATGA

Upstream 100 bases:

>100_bases
AACCTGGGGTGATAACTCCTGCGAAATTACCCCCCCTAACCAAAGTAACATCAGCGAAAGTGCCATTATTTTGCCTTGTA
AAACAGTCAACTAATTCAGG

Downstream 100 bases:

>100_bases
TCATGCATTTTCGCCTACTAGCAATATTGTGCCTGTTTTTTAATGTTTCTTCTTATGCTGTCGATTGCTATCAGAATGAA
CGCTTTGGTAATATCGAAAT

Product: periplasmic pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNKMKSLLTATGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIEDASGKKTRDFISTLPPM
ERIEANEQVQIRLMALASLNNLPQDRETVFYYNVREIPPRAKEQNVMQIAMQSRLKLFWRPKAIELKDGEAVPVQKVTVA
RSANGLTLNNPTPYHITVGYIGTNGKTLMPGTDSIMVTPFGTATQQIKNLPATFLLGFVGDYGGLEMFKIDCNSVQSLCQ
TSPAKKGKL

Sequences:

>Translated_249_residues
MNKMKSLLTATGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIEDASGKKTRDFISTLPPM
ERIEANEQVQIRLMALASLNNLPQDRETVFYYNVREIPPRAKEQNVMQIAMQSRLKLFWRPKAIELKDGEAVPVQKVTVA
RSANGLTLNNPTPYHITVGYIGTNGKTLMPGTDSIMVTPFGTATQQIKNLPATFLLGFVGDYGGLEMFKIDCNSVQSLCQ
TSPAKKGKL
>Mature_249_residues
MNKMKSLLTATGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIEDASGKKTRDFISTLPPM
ERIEANEQVQIRLMALASLNNLPQDRETVFYYNVREIPPRAKEQNVMQIAMQSRLKLFWRPKAIELKDGEAVPVQKVTVA
RSANGLTLNNPTPYHITVGYIGTNGKTLMPGTDSIMVTPFGTATQQIKNLPATFLLGFVGDYGGLEMFKIDCNSVQSLCQ
TSPAKKGKL

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI87082203, Length=236, Percent_Identity=51.271186440678, Blast_Score=268, Evalue=2e-73,
Organism=Escherichia coli, GI1786936, Length=236, Percent_Identity=44.0677966101695, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1788677, Length=223, Percent_Identity=39.9103139013453, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1790771, Length=223, Percent_Identity=34.5291479820628, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787171, Length=209, Percent_Identity=34.9282296650718, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1789532, Length=222, Percent_Identity=29.2792792792793, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786333, Length=236, Percent_Identity=31.3559322033898, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788428, Length=236, Percent_Identity=33.0508474576271, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1786743, Length=182, Percent_Identity=32.967032967033, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87081806, Length=215, Percent_Identity=31.1627906976744, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 27562; Mature: 27562

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKMKSLLTATGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHH
WIEDASGKKTRDFISTLPPMERIEANEQVQIRLMALASLNNLPQDRETVFYYNVREIPPR
HHHHCCCCHHHHHHHHCCCHHHHCCCCEEEEEEEEEHHHCCCCCCCCEEEEEEEECCCCC
AKEQNVMQIAMQSRLKLFWRPKAIELKDGEAVPVQKVTVARSANGLTLNNPTPYHITVGY
CHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCEEEEEEEECCCCEEECCCCCEEEEEEE
IGTNGKTLMPGTDSIMVTPFGTATQQIKNLPATFLLGFVGDYGGLEMFKIDCNSVQSLCQ
EECCCCEECCCCCCEEEEECCHHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHH
TSPAKKGKL
CCCCCCCCC
>Mature Secondary Structure
MNKMKSLLTATGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHH
WIEDASGKKTRDFISTLPPMERIEANEQVQIRLMALASLNNLPQDRETVFYYNVREIPPR
HHHHCCCCHHHHHHHHCCCHHHHCCCCEEEEEEEEEHHHCCCCCCCCEEEEEEEECCCCC
AKEQNVMQIAMQSRLKLFWRPKAIELKDGEAVPVQKVTVARSANGLTLNNPTPYHITVGY
CHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCEEEEEEEECCCCEEECCCCCEEEEEEE
IGTNGKTLMPGTDSIMVTPFGTATQQIKNLPATFLLGFVGDYGGLEMFKIDCNSVQSLCQ
EECCCCEECCCCCCEEEEECCHHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHH
TSPAKKGKL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]