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The map label for this gene is ygiC [H]

Identifier: 218550287

GI number: 218550287

Start: 3046641

End: 3047801

Strand: Direct

Name: ygiC [H]

Synonym: EFER_2979

Alternate gene names: 218550287

Gene position: 3046641-3047801 (Clockwise)

Preceding gene: 218550286

Following gene: 218550288

Centisome position: 66.39

GC content: 47.98

Gene sequence:

>1161_bases
ATGGAAAGAGTCAGTATTACCGAACGCCCGGACTGGCGTGAAAAAGCCCATGAATACGGTTTTAATTTTCACACCATGTA
TGGTGAACCTTACTGGTGTGAAGATGCTTATTACAAACTCACTCTTGCCCAGGTTGAAAAACTGGAAGATGTGACGGCTG
AACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACTAAATTCCGCATTCCAAAA
CACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACTCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGG
CACAGGCGAACCTAAGCTTCTGGAGAATAACGCTGATACGCCAACTTCTCTGTATGAAGCGGCATTCTTTCAGTGGATCT
GGCTGGAAGACCAGCTTAACGCTGGCAACCTGCCGGAAGGCTGTGACCAGTTCAATAGCCTGCAAGAGAAGTTGATAGAG
CGCTTTGCCGAGTTACGGGAGCAATATGGATTCCAGTTGCTGCATCTGACCTGTTGCCGCGATACGGTGGAAGACCGGGG
AACCATTCAATATCTGCAGGATTGTGCAGCTGAAGCAGACATCGCTACCGAATTTCTCTATATCGAAGATATTGGTCTGG
GCGAGAAAGGTCAGTTCACGGATTTGCAGGATCAGGTTATCTCTAACCTGTTTAAGCTCTATCCGTGGGAATATATGCTA
CGTGAAATGTTCTCTACCAAGCTGGAAGATGCTGGCGTACGTTGGCTGGAACCGGCATGGAAGAGCATAATCTCCAACAA
GGCGCTTCTGCCGCTGCTGTGGGAGATGTTCCCAAATCACCCGAACCTGCTGCCAGCCTACTTTGCGGAAGATGATCACC
CGCAAATGGATAAATTTGTCGTTAAACCTATTTTCTCTCGTGAAGGGGCGAACGTCTCTATCATTGAAAATGGCAAAACG
ATCGAGTCGGTAGAAGGTCCATACGGTGAAGAAGGAATGATTGTTCAGCAATTCCATCCTCTGCCGAAATTTGGCGATAG
TTATATGCTAATTGGCAGTTGGCTGATTAATGATCAACCTGCTGGCATTGGTATTCGGGAAGACCGGGCGCTGATTACTC
AAGATTTGTCCCGTTTCTATCCCCACATTTTTGTCGAATAA

Upstream 100 bases:

>100_bases
CGGTTACACGTGGTGGCTTTGGTGAGTCTGTTGCCAAACAGAGCACCATGCAACGTAGTGCAACGGGCTCGACTTCACGT
TCGATGGGCGGCTAATTCAG

Downstream 100 bases:

>100_bases
AGGCACTCCTCTACTGACACAGCATATACAGCTTGAAGTATGAAGACCAAAGTTGCCCTGATTATCAGGGCAACGTCATA
TATTGCAGAAATGATAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCLKVVEKVIASDELMTKFRIPK
HTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGCDQFNSLQEKLIE
RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEADIATEFLYIEDIGLGEKGQFTDLQDQVISNLFKLYPWEYML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMDKFVVKPIFSREGANVSIIENGKT
IESVEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE

Sequences:

>Translated_386_residues
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCLKVVEKVIASDELMTKFRIPK
HTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGCDQFNSLQEKLIE
RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEADIATEFLYIEDIGLGEKGQFTDLQDQVISNLFKLYPWEYML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMDKFVVKPIFSREGANVSIIENGKT
IESVEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE
>Mature_386_residues
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCLKVVEKVIASDELMTKFRIPK
HTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGCDQFNSLQEKLIE
RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEADIATEFLYIEDIGLGEKGQFTDLQDQVISNLFKLYPWEYML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMDKFVVKPIFSREGANVSIIENGKT
IESVEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVE

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=386, Percent_Identity=96.3730569948187, Blast_Score=785, Evalue=0.0,
Organism=Escherichia coli, GI1790629, Length=387, Percent_Identity=49.8708010335917, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1789361, Length=391, Percent_Identity=26.3427109974425, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 45010; Mature: 45010

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCL
CCCCCCCCCCCHHHHHHHCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQLNAGNLPEGCDQFNSLQEKLIERFAELREQYGFQLLHLTCCR
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHH
DTVEDRGTIQYLQDCAAEADIATEFLYIEDIGLGEKGQFTDLQDQVISNLFKLYPWEYML
HHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMDKFV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHH
VKPIFSREGANVSIIENGKTIESVEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLINDQP
HHHHHCCCCCEEEEEECCCEEHHCCCCCCCCCEEHHHCCCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDLSRFYPHIFVE
CCCCCCCCHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCL
CCCCCCCCCCCHHHHHHHCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQLNAGNLPEGCDQFNSLQEKLIERFAELREQYGFQLLHLTCCR
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHH
DTVEDRGTIQYLQDCAAEADIATEFLYIEDIGLGEKGQFTDLQDQVISNLFKLYPWEYML
HHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMDKFV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHH
VKPIFSREGANVSIIENGKTIESVEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLINDQP
HHHHHCCCCCEEEEEECCCEEHHCCCCCCCCCEEHHHCCCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDLSRFYPHIFVE
CCCCCCCCHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]