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The map label for this gene is ygiB [H]

Identifier: 218550286

GI number: 218550286

Start: 3046060

End: 3046635

Strand: Direct

Name: ygiB [H]

Synonym: EFER_2978

Alternate gene names: 218550286

Gene position: 3046060-3046635 (Clockwise)

Preceding gene: 218550285

Following gene: 218550287

Centisome position: 66.38

GC content: 56.08

Gene sequence:

>576_bases
ATGCTGGCGGGCTGTGAAAAGAGTGATGAGACAGTGTCTCTGTATCAAAACGCTGATGATTGTTCAGCTGCAAACCCAGG
CAAAAGTGCAGAATGTACCACCGCGTACAACAATGCGCTGAAAGAAGCCGAACGTACTGCACCGAAATACGCCACCCGTG
AAGACTGTGTTGCCGAATTTGGCGAAGGTCAGTGCCAGCAGGCACCTGCTCAGGCAGGTATGGCACCAGAAAATCAGGCG
CAGGCCCAGCAATCCAGCGGTAGCTTCTGGATGCCGCTGATGGCAGGTTACATGATGGGGCGTCTGATGGGCGGCGGCGC
TGGTTTTGCGCAGCAACCGCTGTTCTCCTCGAAGAACCCTGCCAGCCCGGCTTATGGTAAATATACCGACGCGACCGGTA
AAAACTATGGCGCTGCCCAGCCAGGTCGCACCATGACCGTACCAAAAACGGCCATGGCACCGAAACCTGCAACGACCACG
ACGGTTACACGTGGTGGCTTTGGTGAGTCTGTTGCCAAACAGAGCACCATGCAACGTAGTGCAACGGGCTCGACTTCACG
TTCGATGGGCGGCTAA

Upstream 100 bases:

>100_bases
AAAAATGAAACGGACAAAATCCATACGTCACGCATCGTTCCGCAAAAACTGGAGCGCACGCCATTTGACACCTGTCGCTC
TCGCTGTTGCCACTGTTTTT

Downstream 100 bases:

>100_bases
TTCAGATGGAAAGAGTCAGTATTACCGAACGCCCGGACTGGCGTGAAAAAGCCCATGAATACGGTTTTAATTTTCACACC
ATGTATGGTGAACCTTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQA
QAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTT
TVTRGGFGESVAKQSTMQRSATGSTSRSMGG

Sequences:

>Translated_191_residues
MLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQA
QAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTT
TVTRGGFGESVAKQSTMQRSATGSTSRSMGG
>Mature_191_residues
MLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQA
QAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTT
TVTRGGFGESVAKQSTMQRSATGSTSRSMGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0441 family [H]

Homologues:

Organism=Escherichia coli, GI145693179, Length=191, Percent_Identity=98.9528795811518, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 19816; Mature: 19816

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEF
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNP
CCCHHHHCHHHCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRS
CCCCCCCCCCCCCCCCCCCCCCCEECCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHH
ATGSTSRSMGG
HCCCCCCCCCC
>Mature Secondary Structure
MLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEF
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNP
CCCHHHHCHHHCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRS
CCCCCCCCCCCCCCCCCCCCCCCEECCCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHH
ATGSTSRSMGG
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA