| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is exeH [H]
Identifier: 218550227
GI number: 218550227
Start: 2988213
End: 2988776
Strand: Direct
Name: exeH [H]
Synonym: EFER_2919
Alternate gene names: 218550227
Gene position: 2988213-2988776 (Clockwise)
Preceding gene: 218550226
Following gene: 218550228
Centisome position: 65.12
GC content: 56.38
Gene sequence:
>564_bases GTGCCCAAACGCGGATTCACTCTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA GACTTTTGCGAGCCGTTCTGAACCGCCCGCGAAAAAAGCGGCGCAGGATTTCCTGGCCCGCTTTGCGCAGTTTAAGGACA GGGCAGTGATCGAAGGGCAAACAATCGGTGTGCTAATCGACCCGCCTGGTTATCAGTTTATGCAGCGTCGTCACGGGCAG TGGTTGCCCGTTTCCGCGACCCGGTTATCGGCACAGGTTACGGTGGCGAAACAGGTGCAAATGCTGTTACAACCCGGCAG TGATATCTGGCAGAAGGAGTATGCGCTGGAGCTGCAACGCCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAA AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCGCGCCGTTTACGCTGCGCTTCTACTCG GCGGCGCAAAACGCGTGTTGGGCGGTAAAGCTGGCGCACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCC ATGA
Upstream 100 bases:
>100_bases ACTGTTTGATGTTTACACCTTAGGGGCGGATGGTCAGGAAAACGGGGAAGGTGCTGGCGCAGATATCGGTAACTGGAATT TGCAGGAGTTTCAGTAATCA
Downstream 100 bases:
>100_bases AGCGCGGATTTACCTTGCTGGAAGTGATGATCGCACTGGCGATTTTTGCGCTGGCTGCCACGGCGGTATTACAGATCGCC AGCGGCGCGCTGAGTAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPKRGFTLLEIMLVIFLIGLASAGVVQTFASRSEPPAKKAAQDFLARFAQFKDRAVIEGQTIGVLIDPPGYQFMQRRHGQ WLPVSATRLSAQVTVAKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPAAPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP
Sequences:
>Translated_187_residues MPKRGFTLLEIMLVIFLIGLASAGVVQTFASRSEPPAKKAAQDFLARFAQFKDRAVIEGQTIGVLIDPPGYQFMQRRHGQ WLPVSATRLSAQVTVAKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPAAPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP >Mature_186_residues PKRGFTLLEIMLVIFLIGLASAGVVQTFASRSEPPAKKAAQDFLARFAQFKDRAVIEGQTIGVLIDPPGYQFMQRRHGQW LPVSATRLSAQVTVAKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPAAPFTLRFYSA AQNACWAVKLAHDGALSLNQCDERMP
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002416 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR022346 [H]
Pfam domain/function: PF12019 GspH [H]
EC number: NA
Molecular weight: Translated: 21124; Mature: 20993
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRGFTLLEIMLVIFLIGLASAGVVQTFASRSEPPAKKAAQDFLARFAQFKDRAVIEGQ CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCC TIGVLIDPPGYQFMQRRHGQWLPVSATRLSAQVTVAKQVQMLLQPGSDIWQKEYALELQR EEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RRLTLHDIELELQKEAKKKTPQIRFSPFEPAAPFTLRFYSAAQNACWAVKLAHDGALSLN HHCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEHHHHCCCEEEEEEECCCCCCHH QCDERMP HHHCCCC >Mature Secondary Structure PKRGFTLLEIMLVIFLIGLASAGVVQTFASRSEPPAKKAAQDFLARFAQFKDRAVIEGQ CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCC TIGVLIDPPGYQFMQRRHGQWLPVSATRLSAQVTVAKQVQMLLQPGSDIWQKEYALELQR EEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RRLTLHDIELELQKEAKKKTPQIRFSPFEPAAPFTLRFYSAAQNACWAVKLAHDGALSLN HHCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEHHHHCCCEEEEEEECCCCCCHH QCDERMP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]