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The map label for this gene is mutY [H]

Identifier: 218550211

GI number: 218550211

Start: 2967423

End: 2968475

Strand: Direct

Name: mutY [H]

Synonym: EFER_2903

Alternate gene names: 218550211

Gene position: 2967423-2968475 (Clockwise)

Preceding gene: 218550205

Following gene: 218550212

Centisome position: 64.67

GC content: 54.8

Gene sequence:

>1053_bases
ATGCAAGCGTCGCAATTTTCAGCCCAGGTTCTGGACTGGTACGATAAATACGGGCGAAAAACTCTGCCCTGGCAAATTGA
CAAGACGCCCTACAAAGTATGGCTCTCAGAAGTGATGTTGCAACAAACTCAGGTTGCGACCGTTATCCCCTATTTTGAAC
GCTTTATGGCGCGCTTCCCGACGGTGACCGATCTCGCCAATGCGCCGCTGGACGAAGTTCTCCACTTGTGGACCGGACTG
GGCTATTACGCCCGCGCGCGCAATCTACATAAAGCGGCACAGCAAGTTGCCACCTTACACGGCGGTAAATTCCCGGAAAC
CTTTGATGAGGTCGCCGCGTTACCGGGCGTCGGGCGTTCCACCGCAGGCGCGATTCTCTCACTTTCTCTGGGTAAGCACT
TTCCGATTCTCGACGGTAACGTCAAACGCGTGCTGGCACGCTGCTATGCTGTAAGCGGCTGGCCTGGGAAAAAAGAGGTC
GAGAATAAACTATGGAGTTTAAGCGAGCAGGTGACGCCCGCGGTTGGCGTGGAACGGTTTAATCAGGCGATGATGGATTT
GGGCGCGATGATTTGTACGCGTTCGAAACCGAAATGTTCGCTCTGCCCGCTACAAAACGAGTGTATTGCCACCGCCAACA
ATAGCTGGTCGCTTTATCCGGGCAAAAAACCGAAACAGACGCTACCGGAGCGCACCGGCTACTTTCTGCTGTTACAGCAC
GAAGATGAAGTATTTCTGGCGCAGCGTCCGCCGAGCGGATTGTGGGGCGGTTTATACTGTTTCCCGCAGTTTGCCGATGA
AGAAAGTTTGCGGCAATGGCTGGCGCAACGGCAGATTGCTGCCGATAACCTGATGCAGCTGACCGCGTTTCGCCATACCT
TCAGCCATTTCCACTTAGATATTGTGCCTATGTGGCTTCCCGTGTCGTCATTCACCGGCTGCATGGATGAAGGCAATGCG
CTCTGGTATAACTTAGCGCAACCGCCGTCAGTTGGCCTGGCGGCTCCCGTGGAGCGTTTGTTACAGCAGTTACGCACTGG
CGCGCCGGTTTAG

Upstream 100 bases:

>100_bases
GATGCAAGCATGATAAGGCCGTGGCTGCGGAAAGTTCCGGTTTACACCCTGCCGTCGCTGTGCTGCAATCTTGCCCCCAA
CAACAGTGAATTCGGTGACC

Downstream 100 bases:

>100_bases
CGCGTGAGTCGATAAAGAGGATGATTTATGAGCAGAACGATTTTTTGTACTTTCCTGCAACGTGAAGCAGAAGGTCAGGA
TTTTCAGCTGTACCCCGGCG

Product: adenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGL
GYYARARNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNECIATANNSWSLYPGKKPKQTLPERTGYFLLLQH
EDEVFLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLMQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNA
LWYNLAQPPSVGLAAPVERLLQQLRTGAPV

Sequences:

>Translated_350_residues
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGL
GYYARARNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNECIATANNSWSLYPGKKPKQTLPERTGYFLLLQH
EDEVFLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLMQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNA
LWYNLAQPPSVGLAAPVERLLQQLRTGAPV
>Mature_350_residues
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGL
GYYARARNLHKAAQQVATLHGGKFPETFDEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNECIATANNSWSLYPGKKPKQTLPERTGYFLLLQH
EDEVFLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLMQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNA
LWYNLAQPPSVGLAAPVERLLQQLRTGAPV

Specific function: Adenine glycosylase active on G-A mispairs. MutY also corrects error-prone DNA synthesis past GO lesions which are due to the oxidatively damaged form of guanine:7,8-dihydro-8- oxoguanine (8-oxo-dGTP) [H]

COG id: COG1194

COG function: function code L; A/G-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

Organism=Homo sapiens, GI190358497, Length=361, Percent_Identity=36.01108033241, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI6912520, Length=361, Percent_Identity=36.01108033241, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI115298648, Length=361, Percent_Identity=36.01108033241, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI115298650, Length=361, Percent_Identity=36.01108033241, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI115298654, Length=361, Percent_Identity=36.01108033241, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI115298652, Length=361, Percent_Identity=36.01108033241, Blast_Score=199, Evalue=2e-51,
Organism=Escherichia coli, GI1789331, Length=350, Percent_Identity=98.2857142857143, Blast_Score=717, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR004036
- InterPro:   IPR004035
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR023170
- InterPro:   IPR005760
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF10576 EndIII_4Fe-2S; PF00633 HHH; PF00730 HhH-GPD [H]

EC number: 3.2.2.-

Molecular weight: Translated: 39318; Mature: 39318

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00764 ENDONUCLEASE_III_1 ; PS01155 ENDONUCLEASE_III_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP
CCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFDEVAALPGVGRS
CHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
TAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF
HHHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
NQAMMDLGAMICTRSKPKCSLCPLQNECIATANNSWSLYPGKKPKQTLPERTGYFLLLQH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCHHHCCCCCCEEEEEEC
EDEVFLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLMQLTAFRHTFSHFHLD
CCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
IVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV
EEEHHCCHHHHHCHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP
CCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFDEVAALPGVGRS
CHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC
TAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF
HHHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
NQAMMDLGAMICTRSKPKCSLCPLQNECIATANNSWSLYPGKKPKQTLPERTGYFLLLQH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCHHHCCCCCCEEEEEEC
EDEVFLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLMQLTAFRHTFSHFHLD
CCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
IVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV
EEEHHCCHHHHHCHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 4Fe-4S Cluster [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Glycosylases; Hydrolysing N-glycosyl compounds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2197596; 2001994; 9278503; 9846876 [H]