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The map label for this gene is ybiB [H]

Identifier: 218549633

GI number: 218549633

Start: 2365998

End: 2366960

Strand: Reverse

Name: ybiB [H]

Synonym: EFER_2308

Alternate gene names: 218549633

Gene position: 2366960-2365998 (Counterclockwise)

Preceding gene: 218549634

Following gene: 218549632

Centisome position: 51.58

GC content: 56.28

Gene sequence:

>963_bases
ATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGG
TCTGTATGCCCATATGCTCAATGGTGAAGTCCCTGACCTTGAGTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGGG
AAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCTGCAGACAAGCCG
ATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAA
GCTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACAGAAACCATTTTCGAACTGATGG
GTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCTGTCGGCGCG
TTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACT
GGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGT
TCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCG
CAGATCAATCTCATTGACCGCGAAGGAATGCGGGTGCTGTATGAAAAACAGGACCCTGCTGGTAGCGAGTTACTGCCACA
AGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTGGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAA
TCCAGATGGCTTGCTGCCTGGTGGCTACGGGGGAAGCGGCAACTATCAGCGATGGCCTGGCGCGCGTTAATCAGGCATTT
TAA

Upstream 100 bases:

>100_bases
GCAACCGGAAGTCCCTGAAGGTATAGTTAAAAAGAAAGAAAAAACGAAATCCCCACGCCGTCGGCGGCGTTAATGATGTG
AGTCAGGTAAGGAGTCGTAA

Downstream 100 bases:

>100_bases
TTTTTATCTCAGCCGGATGAGCCACGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTT
CCCGCGCCCGGCGTGCAGCA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPADKP
MPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF

Sequences:

>Translated_320_residues
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPADKP
MPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF
>Mature_320_residues
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPADKP
MPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=320, Percent_Identity=99.375, Blast_Score=654, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N [H]

EC number: NA

Molecular weight: Translated: 35103; Mature: 35103

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML
CCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCHHHH
GFYEAMQNHTIKLTPPADKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED
HHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS
HHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCH
AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC
QINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL
CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEEE
VATGEAATISDGLARVNQAF
EECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML
CCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCHHHH
GFYEAMQNHTIKLTPPADKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED
HHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS
HHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCH
AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
HHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC
QINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL
CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEEE
VATGEAATISDGLARVNQAF
EECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]