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The map label for this gene is napC [H]

Identifier: 218549617

GI number: 218549617

Start: 2349902

End: 2350504

Strand: Reverse

Name: napC [H]

Synonym: EFER_2292

Alternate gene names: 218549617

Gene position: 2350504-2349902 (Counterclockwise)

Preceding gene: 218549618

Following gene: 218549616

Centisome position: 51.22

GC content: 50.91

Gene sequence:

>603_bases
ATGGGAAATTCTGACCGTAAGCCTGGTCTGATTAAGCGCCTGTGGAAATGGTGGCGTACCCCCAGCCGTCTGGCGCTGGG
TACGCTGCTGTTGATCGGTTTTGTTGGCGGTATCGTCTTCTGGGGCGGCTTTAACACCGGGATGGAAAAAGCTAACACTG
AAGAGTTTTGCATTAGCTGCCACGAAATGCGTAACACGGTGTATCAGGAATACATGGATTCCGTGCATTACAACAATCGT
AGCGGCGTCCGTGCGACCTGCCCTGATTGCCATGTCCCGCACGAGTTTGTGCCGAAGATGATCCGTAAACTCAAAGCCAG
TAAAGAGCTGTACGGCAAGATTTTCGGTGTCATTGATACACCGCAGAAGTTTGAAGCACATCGTCTGACGATGGCGCAAA
ACGAGTGGCGGCGCATGAAAGATAACAACTCGCAGGAGTGCCGTAACTGTCACAACTTCGAGTATATGGATGCAACTGCC
CAGAAATCTGTCGCTGCAAAAATGCACGACCAGGCAGTAAAAGCTGGGCAAACCTGTATCGACTGCCATAAAGGGATTGC
ACATAAGCTGCCTGATATGCGCGAAGTTGAGCCAGGTTTCTGA

Upstream 100 bases:

>100_bases
TTACTTCTGTCTGCAATGTCACGTACCGCAGGCTGATACCGCGCCAATCGTGGGGAATACCTTTACCCCGTCAAAAGGTT
ACGGGAAATAAGAGGTTATT

Downstream 100 bases:

>100_bases
CAAGGTAAAGATGAGTGGTAATGCTTGAAGCCAGAGGTTTGCTCTGCGAGCGTGATGAACGAACGTTGTTCAGTGATTTA
TCGTTTTCCCTGAAAGCAGG

Product: cytochrome c-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNR
SGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDATA
QKSVAAKMHDQAVKAGQTCIDCHKGIAHKLPDMREVEPGF

Sequences:

>Translated_200_residues
MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNR
SGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDATA
QKSVAAKMHDQAVKAGQTCIDCHKGIAHKLPDMREVEPGF
>Mature_199_residues
GNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRS
GVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDATAQ
KSVAAKMHDQAVKAGQTCIDCHKGIAHKLPDMREVEPGF

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=200, Percent_Identity=99, Blast_Score=423, Evalue=1e-120,
Organism=Escherichia coli, GI1787230, Length=186, Percent_Identity=49.4623655913978, Blast_Score=181, Evalue=3e-47,
Organism=Escherichia coli, GI1788181, Length=148, Percent_Identity=45.2702702702703, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 23027; Mature: 22896

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISC
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHH
HEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDT
HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDATAQKSVAAKMHDQAVKAGQTCI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DCHKGIAHKLPDMREVEPGF
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISC
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHH
HEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDT
HHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDATAQKSVAAKMHDQAVKAGQTCI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DCHKGIAHKLPDMREVEPGF
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]