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The map label for this gene is araB [H]

Identifier: 218549509

GI number: 218549509

Start: 2220251

End: 2221879

Strand: Direct

Name: araB [H]

Synonym: EFER_2180

Alternate gene names: 218549509

Gene position: 2220251-2221879 (Clockwise)

Preceding gene: 218549508

Following gene: 218549510

Centisome position: 48.39

GC content: 50.71

Gene sequence:

>1629_bases
GTGTCGATCTGTAAGGGCGCAATCATGACAATAACCAAAACCGTTATTGGTGTTGATGTGGGATCAGGCAGTGTCCGCGC
CGGGATTTTTGATCTCAACGGATCTCTGCTATCCCATGCCACAGAAAAAATCACGACTACACGGCGCAGCGGAAGCCGCG
TGGAACAATCCAGCCAGGAGATCTGGCAGGCGGTCTGTTCATGTATTCGTAATGCGCTCACTCTGGCAGACGTTTGTGCA
CAAAGTGTGGCAGGCATCGGTTTTGATGCCACCTGTTCTCTGGTGGTTCTGGATAAAAACGGTGATCCATTGCCTGTCAG
CCCGGAAAGCGATGCAAAGCAAAATATCATTGTGTGGATGGATCACCGCGCCACCGAACAAGCAGAGCGAATCAATGCCA
CTCACCATCCGGTGCTGAACTACGTCGGTGGTAAAATTTCGCCTGAAATGGAAACACCGAAAATTCTCTGGCTGAAAGAA
AATATGCCTGAGATCTACGAACGTGCCGGACAATTTTTCGATCTGGCCGATTTTCTCACCTGGCGGGCTACCGGTGATTT
AGCGCGTTCAGTATGCACTGTTACCTGTAAATGGACTTGGCTGGCGCATGAAAATCGCTGGGATCCAGATTACTTCCGCA
CCATTGGCCTTGCAGAGTTAGCGGATGAAGATTTTATTCGCATTGGTCATCATATTGTTTCTCCTGGAACACCTTGTGGA
AATGGTCTAACAGCACAAGCCGCGGCAGAGATGGGATTACTCCCCGGCACACCTGTCGCTGTGGGGTTAATTGATGCTCA
CGCTGGTGGCATCGGTACGGTTGGCGTAGAAGGTGGAGCGCTGAACAATCTCGCGTATGTTTTCGGCACTTCTTCATGCA
CCATGGCATCTACCACTTCTCCCTCGTTTGTACCGGGTGTCTGGGGGCCATATTACAGTGCGATGGTTCCAGGGCTGTGG
TTAGTTGAAGGCGGGCAAAGTGCTGCGGGAGCGGCTATTGACCAGCTACTGGATTTCCATCCGGCAGTTGAAGAAGCTCG
CGAAATGGCACAACGTGTGAATCAGCCTCTCCCCGTCTGGCTTGCTGATCGAATCCTCGAAAAAACGGCGCAACCATCAG
ATGCTGTCACCCTGGCAAAAGGGCTACACGTGGTGCCGGAATTTCTCGGAAATCGCGCCCCCTTCGCAGATCCTCATGCC
AGAGCGATAATTTGTGGCCTGGGTATGGAGCGAGATCTGGATAATTTACTCGCCTTGTATATCGCTGGATTATGCGGAAT
TGGTTATGGTCTGCGCCAAATTCTCGACGCTCAAACAGCGCAGGGGGTAGTGAGTAAAAATATCGTTATTAGCGGCGGTG
CCGGGCAGCATCCACTGGTACGACAAATTTTGGCAGATACCTGCGGCCTTCCGGTTATTACCACGCAATGCTGCGAACCG
GTTTTATTAGGCTCGGCCATTCTTGGTGCTGTCGCCGGAAATATTGCACCTTCTGTTGGCGAAGCAATGCAACAATTCAC
CCATGTGGATAAATATTATTACCCGCAAGAACGCTATCAATCTCTTCATTATCGTCGATATGAGGCCTATAAGCAGTTGC
AGCATACTGCAAAATTACTCAGAGATTAA

Upstream 100 bases:

>100_bases
GGTAGCCTGATGCAACCGATTGAAGTGGCGGAATCAGTACTATTTATGGTGACACGCTCGAAAAATGTCACCGTGCGAGA
TTTAGTGATCCTGCCTGGCA

Downstream 100 bases:

>100_bases
TTAACCAGCCGCCTGACGCTGTTTTCAGGCAATCAATAATAACGACTCACTCCGGTAATATCCCGGAGTGCATTCATCTG
CACCCTAAAAACGAGGTTTA

Product: Ribitol kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MSICKGAIMTITKTVIGVDVGSGSVRAGIFDLNGSLLSHATEKITTTRRSGSRVEQSSQEIWQAVCSCIRNALTLADVCA
QSVAGIGFDATCSLVVLDKNGDPLPVSPESDAKQNIIVWMDHRATEQAERINATHHPVLNYVGGKISPEMETPKILWLKE
NMPEIYERAGQFFDLADFLTWRATGDLARSVCTVTCKWTWLAHENRWDPDYFRTIGLAELADEDFIRIGHHIVSPGTPCG
NGLTAQAAAEMGLLPGTPVAVGLIDAHAGGIGTVGVEGGALNNLAYVFGTSSCTMASTTSPSFVPGVWGPYYSAMVPGLW
LVEGGQSAAGAAIDQLLDFHPAVEEAREMAQRVNQPLPVWLADRILEKTAQPSDAVTLAKGLHVVPEFLGNRAPFADPHA
RAIICGLGMERDLDNLLALYIAGLCGIGYGLRQILDAQTAQGVVSKNIVISGGAGQHPLVRQILADTCGLPVITTQCCEP
VLLGSAILGAVAGNIAPSVGEAMQQFTHVDKYYYPQERYQSLHYRRYEAYKQLQHTAKLLRD

Sequences:

>Translated_542_residues
MSICKGAIMTITKTVIGVDVGSGSVRAGIFDLNGSLLSHATEKITTTRRSGSRVEQSSQEIWQAVCSCIRNALTLADVCA
QSVAGIGFDATCSLVVLDKNGDPLPVSPESDAKQNIIVWMDHRATEQAERINATHHPVLNYVGGKISPEMETPKILWLKE
NMPEIYERAGQFFDLADFLTWRATGDLARSVCTVTCKWTWLAHENRWDPDYFRTIGLAELADEDFIRIGHHIVSPGTPCG
NGLTAQAAAEMGLLPGTPVAVGLIDAHAGGIGTVGVEGGALNNLAYVFGTSSCTMASTTSPSFVPGVWGPYYSAMVPGLW
LVEGGQSAAGAAIDQLLDFHPAVEEAREMAQRVNQPLPVWLADRILEKTAQPSDAVTLAKGLHVVPEFLGNRAPFADPHA
RAIICGLGMERDLDNLLALYIAGLCGIGYGLRQILDAQTAQGVVSKNIVISGGAGQHPLVRQILADTCGLPVITTQCCEP
VLLGSAILGAVAGNIAPSVGEAMQQFTHVDKYYYPQERYQSLHYRRYEAYKQLQHTAKLLRD
>Mature_541_residues
SICKGAIMTITKTVIGVDVGSGSVRAGIFDLNGSLLSHATEKITTTRRSGSRVEQSSQEIWQAVCSCIRNALTLADVCAQ
SVAGIGFDATCSLVVLDKNGDPLPVSPESDAKQNIIVWMDHRATEQAERINATHHPVLNYVGGKISPEMETPKILWLKEN
MPEIYERAGQFFDLADFLTWRATGDLARSVCTVTCKWTWLAHENRWDPDYFRTIGLAELADEDFIRIGHHIVSPGTPCGN
GLTAQAAAEMGLLPGTPVAVGLIDAHAGGIGTVGVEGGALNNLAYVFGTSSCTMASTTSPSFVPGVWGPYYSAMVPGLWL
VEGGQSAAGAAIDQLLDFHPAVEEAREMAQRVNQPLPVWLADRILEKTAQPSDAVTLAKGLHVVPEFLGNRAPFADPHAR
AIICGLGMERDLDNLLALYIAGLCGIGYGLRQILDAQTAQGVVSKNIVISGGAGQHPLVRQILADTCGLPVITTQCCEPV
LLGSAILGAVAGNIAPSVGEAMQQFTHVDKYYYPQERYQSLHYRRYEAYKQLQHTAKLLRD

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=541, Percent_Identity=44.547134935305, Blast_Score=456, Evalue=1e-128,
Organism=Homo sapiens, GI164663830, Length=565, Percent_Identity=42.6548672566372, Blast_Score=442, Evalue=1e-124,
Organism=Homo sapiens, GI42794763, Length=488, Percent_Identity=25.4098360655738, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4504007, Length=488, Percent_Identity=25.4098360655738, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI189409120, Length=488, Percent_Identity=25.4098360655738, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI41393575, Length=485, Percent_Identity=23.9175257731959, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1786249, Length=568, Percent_Identity=26.7605633802817, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787789, Length=546, Percent_Identity=24.5421245421245, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789987, Length=546, Percent_Identity=23.2600732600733, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1790005, Length=533, Percent_Identity=24.015009380863, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1790361, Length=543, Percent_Identity=23.0202578268877, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17535599, Length=541, Percent_Identity=23.8447319778189, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6320314, Length=557, Percent_Identity=36.2657091561939, Blast_Score=337, Evalue=2e-93,
Organism=Saccharomyces cerevisiae, GI6324080, Length=464, Percent_Identity=25.8620689655172, Blast_Score=129, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24657106, Length=541, Percent_Identity=39.3715341959335, Blast_Score=368, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24657102, Length=541, Percent_Identity=39.3715341959335, Blast_Score=368, Evalue=1e-102,
Organism=Drosophila melanogaster, GI21356323, Length=437, Percent_Identity=37.9862700228833, Blast_Score=281, Evalue=1e-75,
Organism=Drosophila melanogaster, GI17864214, Length=504, Percent_Identity=24.2063492063492, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24654573, Length=423, Percent_Identity=24.3498817966903, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24655555, Length=435, Percent_Identity=22.7586206896552, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24655560, Length=435, Percent_Identity=22.7586206896552, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24655570, Length=435, Percent_Identity=22.7586206896552, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24655574, Length=435, Percent_Identity=22.7586206896552, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24655565, Length=435, Percent_Identity=22.7586206896552, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 58248; Mature: 58117

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSICKGAIMTITKTVIGVDVGSGSVRAGIFDLNGSLLSHATEKITTTRRSGSRVEQSSQE
CCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH
IWQAVCSCIRNALTLADVCAQSVAGIGFDATCSLVVLDKNGDPLPVSPESDAKQNIIVWM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
DHRATEQAERINATHHPVLNYVGGKISPEMETPKILWLKENMPEIYERAGQFFDLADFLT
CCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHHH
WRATGDLARSVCTVTCKWTWLAHENRWDPDYFRTIGLAELADEDFIRIGHHIVSPGTPCG
HHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
NGLTAQAAAEMGLLPGTPVAVGLIDAHAGGIGTVGVEGGALNNLAYVFGTSSCTMASTTS
CCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCEEECCCC
PSFVPGVWGPYYSAMVPGLWLVEGGQSAAGAAIDQLLDFHPAVEEAREMAQRVNQPLPVW
CCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHH
LADRILEKTAQPSDAVTLAKGLHVVPEFLGNRAPFADPHARAIICGLGMERDLDNLLALY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHH
IAGLCGIGYGLRQILDAQTAQGVVSKNIVISGGAGQHPLVRQILADTCGLPVITTQCCEP
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEHHHCCH
VLLGSAILGAVAGNIAPSVGEAMQQFTHVDKYYYPQERYQSLHYRRYEAYKQLQHTAKLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RD
CC
>Mature Secondary Structure 
SICKGAIMTITKTVIGVDVGSGSVRAGIFDLNGSLLSHATEKITTTRRSGSRVEQSSQE
CCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH
IWQAVCSCIRNALTLADVCAQSVAGIGFDATCSLVVLDKNGDPLPVSPESDAKQNIIVWM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
DHRATEQAERINATHHPVLNYVGGKISPEMETPKILWLKENMPEIYERAGQFFDLADFLT
CCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHHH
WRATGDLARSVCTVTCKWTWLAHENRWDPDYFRTIGLAELADEDFIRIGHHIVSPGTPCG
HHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
NGLTAQAAAEMGLLPGTPVAVGLIDAHAGGIGTVGVEGGALNNLAYVFGTSSCTMASTTS
CCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCEEECCCC
PSFVPGVWGPYYSAMVPGLWLVEGGQSAAGAAIDQLLDFHPAVEEAREMAQRVNQPLPVW
CCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHH
LADRILEKTAQPSDAVTLAKGLHVVPEFLGNRAPFADPHARAIICGLGMERDLDNLLALY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHH
IAGLCGIGYGLRQILDAQTAQGVVSKNIVISGGAGQHPLVRQILADTCGLPVITTQCCEP
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEHHHCCH
VLLGSAILGAVAGNIAPSVGEAMQQFTHVDKYYYPQERYQSLHYRRYEAYKQLQHTAKLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA