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The map label for this gene is yeeY [H]

Identifier: 218549428

GI number: 218549428

Start: 2125150

End: 2126079

Strand: Reverse

Name: yeeY [H]

Synonym: EFER_2098

Alternate gene names: 218549428

Gene position: 2126079-2125150 (Counterclockwise)

Preceding gene: 218549429

Following gene: 218549427

Centisome position: 46.33

GC content: 51.18

Gene sequence:

>930_bases
ATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGAAAAAGAAGGCAGTTTTGCGGCGGCGTCGGCCAAACT
CTATAAGACGCCGTCCGCTCTGAGTTACACCGTTCACAAGCTGGAAAGCGACCTTAACATTCAATTGCTTGATCGTAGCG
GTCACCGCGCTAAATTCACCCGCACCGGAAAAATGTTATTAGAGAAGGGGCGGGAAGTTCTGCATACCGTGCGAGAACTG
GAAAAGCAGGCGATAAAACTGCATGAAGGCTGGGAAAACGAGCTGGTGATTGGCGTGGACGACACCTTCCCTTTTTCTCT
CCTCGCGCCACTTATAGAAGCTTTTTACCAACATCATAGCGTGACGCGCCTGAAGTTTATCAATGGCGTGCTCGGTGGTT
CCTGGGATGCCCTGACTCAGGGACGAGCGGATATTATTGTTGGTGCGATGCATGAGCCACCATCTTCCAGTGAGTTTGGT
TTTTCACGGTTGGGTGATCTCGAACAAGTCTTTGCGGTCGCGCCTCATCATCCGTTAGCCCAGGAAGAAGAGCCGTTAAA
ACGTCGTATCATTAAACGATATCGGGCGATTGTGGTGGGGGATACTGCGCAGGCAGGCGCTTCTACGGCCTCGCAACTTC
TCGACGAACAAGAAGCCATTACCGTTTTCGATTTTAAAACCAAGCTGGAGCTGCAAATTAGCGGCCTCGGCTGCGGCTAT
TTACCTCGTTATCTGGCGCAACGTTTTCTCGATAGTGGCGCGTTAATCGAGAAGAAAGTGGTCGCCCAAACTCTCTTTGA
ACCTGTCTGGATTGGCTGGAACGAACAGACCGCAGGACTTGCCAGCGCCTGGTGGCGGGACGAGATTTTAGCAAATAGTG
CGATCACGGGAGTCTATGCAAATTCCACGCACCATAAATCAGCCGGTTAA

Upstream 100 bases:

>100_bases
TGAACTGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCA
TGCACTGCAAGGGGGCGTGT

Downstream 100 bases:

>100_bases
AGAAAATTTTTTATGACAAGCCTCTCATTCTCTTGTCATTTACCCCCCATTTAGGCACAATGCGCCGCTGTCAAAAAATG
ACTAAAACCGACGTTTAATT

Product: DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLKRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAITGVYANSTHHKSAG

Sequences:

>Translated_309_residues
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLKRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAITGVYANSTHHKSAG
>Mature_309_residues
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLKRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAITGVYANSTHHKSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=308, Percent_Identity=97.4025974025974, Blast_Score=610, Evalue=1e-176,
Organism=Escherichia coli, GI1789492, Length=286, Percent_Identity=38.8111888111888, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1787949, Length=249, Percent_Identity=30.9236947791165, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1786508, Length=301, Percent_Identity=25.9136212624585, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786713, Length=277, Percent_Identity=24.9097472924188, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1790262, Length=278, Percent_Identity=26.6187050359712, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787601, Length=165, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87082132, Length=258, Percent_Identity=25.968992248062, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34261; Mature: 34261

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT
CCHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA
HHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCC
QEEEPLKRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
CCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAITGVYA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCHHEEEEE
NSTHHKSAG
CCCCCCCCC
>Mature Secondary Structure
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT
CCHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA
HHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCC
QEEEPLKRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
CCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAITGVYA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCHHEEEEE
NSTHHKSAG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]