| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is pduV [H]
Identifier: 218549358
GI number: 218549358
Start: 2075531
End: 2075980
Strand: Direct
Name: pduV [H]
Synonym: EFER_2026
Alternate gene names: 218549358
Gene position: 2075531-2075980 (Clockwise)
Preceding gene: 218549357
Following gene: 218549359
Centisome position: 45.23
GC content: 48.44
Gene sequence:
>450_bases ATGATGAAACGTATGATGTTAATTGGCCCAAGCCAGTGCGGGAAGACCTCCCTGACACAGTGGATGCGGGGTGAAACGCT ACGTTATCAGAAAACTCAGGCCATTGTCTGGACGCCTGCCACGATTGATACCCCCGGCGAGTATCTGGAAAACCGCAGAC TTTACAGTGCGCTACTGGTTAGCGCATGTGAGGCAGATGTTATAGCTCTGGTGCTGAATGCCAATGCCACATGGTCGCCC TTTTCTCCGGGATTTACCGGACCGATGAACAGACCAACAATTGGTATTCTCACCAAAGTAGATTTGGCTGACGAGCAAAA TGTTTCACGAACTGAACAGTGGCTCAAACAAGCCGGAGCACAGCAGATTTTCATTACCAGCGCAGTCGCCAAAAGTGGAC TGGACGAAATATTTACTTATTTGAATGTAGAGGCTCTTCATGTCACATAA
Upstream 100 bases:
>100_bases ACAGGCGATGTCTCCGCCGTTGAATATGCACTAAAACAGGTAACGCGTACGCTGGGGGAAATGCTGCGTTTTACCGCCTG CCCCATTACCCGGACGTAGC
Downstream 100 bases:
>100_bases AATCATGGCGATTAACGCGGGCAGCTCATCGCTTAAGTTTCAGTTACTGGCAATGCCGGAAGGCGAAATCTTATGCCAGG GAATAATTGAACGTATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MMKRMMLIGPSQCGKTSLTQWMRGETLRYQKTQAIVWTPATIDTPGEYLENRRLYSALLVSACEADVIALVLNANATWSP FSPGFTGPMNRPTIGILTKVDLADEQNVSRTEQWLKQAGAQQIFITSAVAKSGLDEIFTYLNVEALHVT
Sequences:
>Translated_149_residues MMKRMMLIGPSQCGKTSLTQWMRGETLRYQKTQAIVWTPATIDTPGEYLENRRLYSALLVSACEADVIALVLNANATWSP FSPGFTGPMNRPTIGILTKVDLADEQNVSRTEQWLKQAGAQQIFITSAVAKSGLDEIFTYLNVEALHVT >Mature_149_residues MMKRMMLIGPSQCGKTSLTQWMRGETLRYQKTQAIVWTPATIDTPGEYLENRRLYSALLVSACEADVIALVLNANATWSP FSPGFTGPMNRPTIGILTKVDLADEQNVSRTEQWLKQAGAQQIFITSAVAKSGLDEIFTYLNVEALHVT
Specific function: Ethanolamine utilization. [C]
COG id: COG4917
COG function: function code E; Ethanolamine utilization protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutP/pduV family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012381 [H]
Pfam domain/function: PF10662 PduV-EutP [H]
EC number: NA
Molecular weight: Translated: 16540; Mature: 16540
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRMMLIGPSQCGKTSLTQWMRGETLRYQKTQAIVWTPATIDTPGEYLENRRLYSALLV CCCCEEEECCCCCCHHHHHHHHCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHH SACEADVIALVLNANATWSPFSPGFTGPMNRPTIGILTKVDLADEQNVSRTEQWLKQAGA HHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC QQIFITSAVAKSGLDEIFTYLNVEALHVT CEEEEHHHHHHCCHHHHHHHHCCEEEEEC >Mature Secondary Structure MMKRMMLIGPSQCGKTSLTQWMRGETLRYQKTQAIVWTPATIDTPGEYLENRRLYSALLV CCCCEEEECCCCCCHHHHHHHHCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHH SACEADVIALVLNANATWSPFSPGFTGPMNRPTIGILTKVDLADEQNVSRTEQWLKQAGA HHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC QQIFITSAVAKSGLDEIFTYLNVEALHVT CEEEEHHHHHHCCHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10498708; 11677609 [H]