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The map label for this gene is erfK [H]

Identifier: 218549337

GI number: 218549337

Start: 2056909

End: 2057835

Strand: Reverse

Name: erfK [H]

Synonym: EFER_2002

Alternate gene names: 218549337

Gene position: 2057835-2056909 (Counterclockwise)

Preceding gene: 218549338

Following gene: 218549322

Centisome position: 44.85

GC content: 49.3

Gene sequence:

>927_bases
ATGATACGTCGTGTATGTATTCTTGGTTCTTTTATTCTACTTTCCGTCTGGCAAACGAGTCTGGCGGTAACTTACCCACT
TCCACCAGAAGGTAGCCGATTAGTGGGTGCACCATTAACCATTCAGGTGCCTGAACATAACACACAACCACTGGAAACAT
TTGCAGCGCAGTACGGGCAAGGGCTTAGCAATATGCTGGAGGCAAACCCTGGTACTGATGTTTTTTTACCGAAATCAGGC
TCAACACTGGTCGTGCCGCAACAGCTTATTCTTCCGGCAACAGTCCGTAAGGGGATGGTGGTGAATGTGGCTGAAATGCG
CCTTTACTATTATCCACCAGACAGCCAGACCGTTGAAGTTTTTCCCATTGGCATCGGTCAGGCCGGGCGTGAAACGCCGC
GCAATTGGGTAACGACGGTGGAGCGTAAACAGGAAGCGCCAACGTGGACACCAACGCCAAACACCCGCCGTGAATATGCA
AAGCGTGGGGAGAGTCTGCCTGCATTTATTCCTGCCGGGCCGGAAAACCCAATGGGGTTGTATGCCATCTATATTGGTCG
CCTTTATGCTATTCATGGTACGAATGCCAACTTTGGTATTGGACTGAGGGTAAGTCAGGGATGTATTCGTCTGCGCGATA
ACGATATCAAATATCTGTTTGATAATGTTCCTGTTGGGACGCGCGTACAAATTATTGACCAGCCAGTGAAATACACCACA
GAACCAGATGGCTCGAACTGGCTGGAAGTTCATGAACCGTTATCACGAAATCGTGCGGAGTTTGAGTCTGACAGAAAGGT
GCCGTTACCAATTACCCCTGCGCTGCGTGCTTTTATCAACGGACAAGAGGTAGATGTGCAACGTGCCAATGCCGCTATGG
AACGTCGATCAGGAATGCCGGTGAATATCAATCGTACAGCATTTTGA

Upstream 100 bases:

>100_bases
CAACCTTTACTGCGTCGCTGTGGCTTGTTGACCTGCTACCAGCGAAAAGTCTGATAAAAGCTATACTTATTGAATATCTG
TCGCGACTAAGGAAAGGGAA

Downstream 100 bases:

>100_bases
TATGTAAATTAGAATGCGCCATTTGTAAGCAATACAAATGGCGCTGTATAAAACACCCTTACGTCATTACATACCTGAGA
ATACATTCATAATAATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MIRRVCILGSFILLSVWQTSLAVTYPLPPEGSRLVGAPLTIQVPEHNTQPLETFAAQYGQGLSNMLEANPGTDVFLPKSG
STLVVPQQLILPATVRKGMVVNVAEMRLYYYPPDSQTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
KRGESLPAFIPAGPENPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRDNDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSNWLEVHEPLSRNRAEFESDRKVPLPITPALRAFINGQEVDVQRANAAMERRSGMPVNINRTAF

Sequences:

>Translated_308_residues
MIRRVCILGSFILLSVWQTSLAVTYPLPPEGSRLVGAPLTIQVPEHNTQPLETFAAQYGQGLSNMLEANPGTDVFLPKSG
STLVVPQQLILPATVRKGMVVNVAEMRLYYYPPDSQTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
KRGESLPAFIPAGPENPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRDNDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSNWLEVHEPLSRNRAEFESDRKVPLPITPALRAFINGQEVDVQRANAAMERRSGMPVNINRTAF
>Mature_308_residues
MIRRVCILGSFILLSVWQTSLAVTYPLPPEGSRLVGAPLTIQVPEHNTQPLETFAAQYGQGLSNMLEANPGTDVFLPKSG
STLVVPQQLILPATVRKGMVVNVAEMRLYYYPPDSQTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
KRGESLPAFIPAGPENPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRDNDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSNWLEVHEPLSRNRAEFESDRKVPLPITPALRAFINGQEVDVQRANAAMERRSGMPVNINRTAF

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=303, Percent_Identity=89.1089108910891, Blast_Score=560, Evalue=1e-161,
Organism=Escherichia coli, GI1787040, Length=304, Percent_Identity=60.5263157894737, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1787356, Length=287, Percent_Identity=48.0836236933798, Blast_Score=270, Evalue=7e-74,
Organism=Escherichia coli, GI1787968, Length=306, Percent_Identity=43.4640522875817, Blast_Score=232, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34255; Mature: 34255

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRVCILGSFILLSVWQTSLAVTYPLPPEGSRLVGAPLTIQVPEHNTQPLETFAAQYGQ
CCEEEEHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHCC
GLSNMLEANPGTDVFLPKSGSTLVVPQQLILPATVRKGMVVNVAEMRLYYYPPDSQTVEV
CHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEE
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFIPAGPENPMGL
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEE
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRDNDIKYLFDNVPVGTRVQIIDQPVKYTT
EEEEEEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEECCCCCCCEEEEEECCCEECC
EPDGSNWLEVHEPLSRNRAEFESDRKVPLPITPALRAFINGQEVDVQRANAAMERRSGMP
CCCCCCCEEECCCHHCCHHHHHCCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHCCCC
VNINRTAF
EEECCCCC
>Mature Secondary Structure
MIRRVCILGSFILLSVWQTSLAVTYPLPPEGSRLVGAPLTIQVPEHNTQPLETFAAQYGQ
CCEEEEHHHHHHHHHHHHHHEEEEECCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHCC
GLSNMLEANPGTDVFLPKSGSTLVVPQQLILPATVRKGMVVNVAEMRLYYYPPDSQTVEV
CHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEE
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFIPAGPENPMGL
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEE
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRDNDIKYLFDNVPVGTRVQIIDQPVKYTT
EEEEEEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEECCCCCCCEEEEEECCCEECC
EPDGSNWLEVHEPLSRNRAEFESDRKVPLPITPALRAFINGQEVDVQRANAAMERRSGMP
CCCCCCCEEECCCHHCCHHHHHCCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHCCCC
VNINRTAF
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]