| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is ydiL [H]
Identifier: 218548726
GI number: 218548726
Start: 1398901
End: 1399404
Strand: Reverse
Name: ydiL [H]
Synonym: EFER_1363
Alternate gene names: 218548726
Gene position: 1399404-1398901 (Counterclockwise)
Preceding gene: 218548727
Following gene: 218548724
Centisome position: 30.5
GC content: 40.87
Gene sequence:
>504_bases TTGCCCATCTCCCACGATGGGCTTTTTTTTAACATTTCCATCTCGTTACCGTTCAAATTGAATAAATTGAGTTGTGATTC TTCTCAAGCCGTTAGCGGGCTAATAGTGCTATTATGTAACATCGATTTTTTAACTTGCCGACAAATAATGAACGGATACG AATTAAAAGCACTACGCCTGATTTTTGCTATGACGACACAAGAATGTGCCCAGTGGATTGCTCTGGATGGCAATGAAGCT AACTGGCAACAATGGGAAAACGGCGACCATGACATTCCAGCCAACGTGATTGAAACGTTGTTGACCATGAGAAGTCAAAG GAAGGACCGTATTCATGCCATTATCAGTAAAATAAATAGTCGTATCGGAAATAACACGATGCGTTATTTCAACGATCTGA GCAGTTTTCAGGCGGTATATCCGAATGCAGATTTTCTCGAGTGGAAAATTTACCAGTCAGTGGCTAATGAATTGTACGCC CACGATTTAGAGCGTCTTTGTTAA
Upstream 100 bases:
>100_bases ACGCCCCATGCCTACTATTAGGTCACGGTTATAAATCAACGTATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAA CGAATTGCTGTGTGTAGTCT
Downstream 100 bases:
>100_bases CTCCTCGCACCATAAAAAAAGCAGTGTTGCCACAATTGTGACAACACTGCTTGTCGATCACGTTGTTAAATTACTTTTTC AGCTCTGCAAGGCTCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRLIFAMTTQECAQWIALDGNEA NWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINSRIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYA HDLERLC
Sequences:
>Translated_167_residues MPISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRLIFAMTTQECAQWIALDGNEA NWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINSRIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYA HDLERLC >Mature_166_residues PISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRLIFAMTTQECAQWIALDGNEAN WQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINSRIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYAH DLERLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081956, Length=118, Percent_Identity=67.7966101694915, Blast_Score=174, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015060 - InterPro: IPR010982 [H]
Pfam domain/function: PF08965 DUF1870 [H]
EC number: NA
Molecular weight: Translated: 19208; Mature: 19077
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRL CCCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH IFAMTTQECAQWIALDGNEANWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINS HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYAHDLERLC HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRL CCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH IFAMTTQECAQWIALDGNEANWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINS HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYAHDLERLC HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]