Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

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The map label for this gene is ydiL [H]

Identifier: 218548726

GI number: 218548726

Start: 1398901

End: 1399404

Strand: Reverse

Name: ydiL [H]

Synonym: EFER_1363

Alternate gene names: 218548726

Gene position: 1399404-1398901 (Counterclockwise)

Preceding gene: 218548727

Following gene: 218548724

Centisome position: 30.5

GC content: 40.87

Gene sequence:

>504_bases
TTGCCCATCTCCCACGATGGGCTTTTTTTTAACATTTCCATCTCGTTACCGTTCAAATTGAATAAATTGAGTTGTGATTC
TTCTCAAGCCGTTAGCGGGCTAATAGTGCTATTATGTAACATCGATTTTTTAACTTGCCGACAAATAATGAACGGATACG
AATTAAAAGCACTACGCCTGATTTTTGCTATGACGACACAAGAATGTGCCCAGTGGATTGCTCTGGATGGCAATGAAGCT
AACTGGCAACAATGGGAAAACGGCGACCATGACATTCCAGCCAACGTGATTGAAACGTTGTTGACCATGAGAAGTCAAAG
GAAGGACCGTATTCATGCCATTATCAGTAAAATAAATAGTCGTATCGGAAATAACACGATGCGTTATTTCAACGATCTGA
GCAGTTTTCAGGCGGTATATCCGAATGCAGATTTTCTCGAGTGGAAAATTTACCAGTCAGTGGCTAATGAATTGTACGCC
CACGATTTAGAGCGTCTTTGTTAA

Upstream 100 bases:

>100_bases
ACGCCCCATGCCTACTATTAGGTCACGGTTATAAATCAACGTATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAA
CGAATTGCTGTGTGTAGTCT

Downstream 100 bases:

>100_bases
CTCCTCGCACCATAAAAAAAGCAGTGTTGCCACAATTGTGACAACACTGCTTGTCGATCACGTTGTTAAATTACTTTTTC
AGCTCTGCAAGGCTCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRLIFAMTTQECAQWIALDGNEA
NWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINSRIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYA
HDLERLC

Sequences:

>Translated_167_residues
MPISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRLIFAMTTQECAQWIALDGNEA
NWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINSRIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYA
HDLERLC
>Mature_166_residues
PISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRLIFAMTTQECAQWIALDGNEAN
WQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINSRIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYAH
DLERLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081956, Length=118, Percent_Identity=67.7966101694915, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015060
- InterPro:   IPR010982 [H]

Pfam domain/function: PF08965 DUF1870 [H]

EC number: NA

Molecular weight: Translated: 19208; Mature: 19077

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRL
CCCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
IFAMTTQECAQWIALDGNEANWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINS
HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYAHDLERLC
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PISHDGLFFNISISLPFKLNKLSCDSSQAVSGLIVLLCNIDFLTCRQIMNGYELKALRL
CCCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
IFAMTTQECAQWIALDGNEANWQQWENGDHDIPANVIETLLTMRSQRKDRIHAIISKINS
HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGNNTMRYFNDLSSFQAVYPNADFLEWKIYQSVANELYAHDLERLC
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]