| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yebT [H]
Identifier: 218548606
GI number: 218548606
Start: 1278204
End: 1280837
Strand: Reverse
Name: yebT [H]
Synonym: EFER_1240
Alternate gene names: 218548606
Gene position: 1280837-1278204 (Counterclockwise)
Preceding gene: 218548607
Following gene: 218548605
Centisome position: 27.91
GC content: 53.08
Gene sequence:
>2634_bases ATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCC GTTCATCGCGCTTATGATTGCCGGTTGGCTGATTTGGGACAGTTATCAGGATCGGGGTAATACCGTCACCATCGACTTTA TGTCGGCGGACGGTATCGTCCCCGGCCGAACGCCTGTTCGTTATCAGGGTGTTGAAGTCGGAACTGTGCAGGATATCAGC CTGAGCGACGATCTTCGTAAGATTGAAGTCAAAGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACACA GTTTTGGCTGGTGACGCCAAAGGCATCGCTGGCAGGAGTCTCCGGGCTGGACGCCCTCGTCGGTGGTAACTATATCGGCA TGATGCCGGGTAAAGGTAAAGAGCAGGATCACTTTGTCGCACTCGACACCCAACCAAAATATCGGCTGGATAACGGCGAT CTGATGATCCACCTGCAAGCCCCCGATCTCGGTTCACTGAACAGTGGTTCATTGGTATATTTCCGTAAGATCCCGGTGGG TAAAGTCTACGACTATGCCATCAATCCCAATAAGCAAGGCGTGGTGATTGATGTCCTGATCGAGCGGCGTTTTACCGATC TGGTGAAAAAAGGTAGCCGTTTCTGGAACGTTTCCGGCGTTGATGCCAACGTCAGTATCAGTGGCGCGAAGGTGAAACTG GAAAGTCTGGCGGCACTGGTTAACGGTGCGATTGCCTTCGATTCACCTGAAGAGTCGAAACCTGCCGAGGCGGAAGATAC CTTTGGTCTGTATGAAGATCTGGCCCATAGCCAGCGTGGCGTAATAATAAAACTGGAACTGCCGAGCGGTGCCGGATTAA CCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTTGGACAACTAACTAAACTGGATTTAAATCCTGGTGGTAAA GTCACCGGAGAAATGACCGTTGATCCCAGCGTCGTCACGCTGTTACGGGAAAATACCCGCATCGAATTACGTAATCCAAA ATTATCCCTTAGCGATGCTAATCTCAGTGCCCTGCTGACCGGCAAAACCTTCGAGTTGGTGCCGGGCGACGGTGAGCCAC GTAAAGAATTTATTGTTGTTCCTGGCGAAAAAGCCCTGCTCCATGAGCCAGATGTTCTGACGCTGACCCTGACCGCGCCG GAAAGTTACGGTATTGATGCTGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCAC CAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGACCTGGTAAAAGGCGATAGCAAATTTGTCGTCA ACAGTCGTGTCGACGTGAAAGTGGGGCTGGACGGCGTCGAGTTTCTCGGCGCCAGCGCCTCAGAATGGATCAACGGCGGG ATCCGCATTCTTCCTGGTGATAAAGGCGCAATGAAACCCAGCTATCCGCTGTATGCCAATCTGGAAAAAGCGCTGGAGAA CAGCCTTAGCGATTTGCCCACCACAACCGTGAGTTTGAGTGCAGAGACATTGCCGGATGTGCAAGCGGGATCGGTAGTGC TGTACCGTAAATTTGAAGTTGGTGAAGTTATTACCGTACGTCCCCGAGCTAACGCGTTTGATATCGATCTGCATATTAAG CCGGAATACCGCAACCTCTTGACCAGTAATAGCGTGTTCTGGGCAGAAGGTGGGGCGAAAGTTCAGCTGAATGGTAGTGG CTTGACCGTACAGGCATCCCCGCTCTCCAGAGCATTAAAGGGGGCTATTAGCTTCGATAACCTCAGCGGTGCCAGCGCCA GCCAACGTAAAGGTGACAAGCGAATTCTGTATGCTTCCGAAACAGCGGCCCGTGCGGTTGGCGGACAGATTACGCTCCAC GCTTTCGATGCCGGAAAACTGGCAGTCGGGATGCCAATTCGCTATCTCGGTATTGATATCGGGCAAATTCAGACGCTGGA CCTGATTACCGCGCGCAATGAAGTACAGGCAAAGGCGGTGCTCTACCCGGAATATGTCCAGACCTTTGCGCGCGGAGGTA CACGCTTCTCAGTGGTCACTCCGCAAATTTCGGCAGCGGGCGTTGAGCATCTTGATACTATCCTCCAGCCGTATATCAAC GTCGAACCAGGCCGGGGCAATCCTCGCCGTGACTTTGAATTACAAGAGGCCACCATAACTGATTCGCGTTACCTGGATGG CTTAAGCATTATTGTTGAAGCGCCGGAAGCCGGTTCGTTAGGCATCGGTACGCCTGTGCTGTTCCGTGGTCTGGAAGTAG GTACGGTTACCGGAATGACGCTGGGGACACTGTCAGATCGCGTGATGATTGCGATGCGCATCAGTAAACGCTATCAACAC CTGGTGCGTAACAATTCCGTCTTCTGGTTGGCATCGGGTTACAGTCTGGATTTTGGTCTGACTGGCGGCGTGGTGAAAAC CGGCACCTTTAACCAGTTTATCCGTGGCGGCATCGCCTTTGCCACGCCTCCGGGTACTCCGCTGGCACCGAAAGCCCAGG AAGGTAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTGCCCAAATAA
Upstream 100 bases:
>100_bases GCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAG CCGCTTACTTTGGGATGCAC
Downstream 100 bases:
>100_bases TGTCCATTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAGTGGTATATGCTCG TGGCCCAACACACCGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 877; Mature: 876
Protein sequence:
>877_residues MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDIS LSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGK VTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFIVVPGEKALLHEPDVLTLTLTAP ESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRDLVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG IRILPGDKGAMKPSYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIK PEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLH AFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN VEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQH LVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
Sequences:
>Translated_877_residues MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDIS LSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGK VTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFIVVPGEKALLHEPDVLTLTLTAP ESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRDLVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG IRILPGDKGAMKPSYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIK PEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLH AFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN VEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQH LVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK >Mature_876_residues SQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISL SDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDL MIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKLE SLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKV TGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFIVVPGEKALLHEPDVLTLTLTAPE SYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRDLVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGGI RILPGDKGAMKPSYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKP EYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHA FDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINV EPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQHL VRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=877, Percent_Identity=99.4298745724059, Blast_Score=1763, Evalue=0.0, Organism=Escherichia coli, GI1787184, Length=267, Percent_Identity=32.5842696629214, Blast_Score=161, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 94910; Mature: 94778
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADGIV CCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCC PGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGV CCCCCCEECCEEECEEEECCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHCCC SGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSLVY CCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCEEE FRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL EEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEH ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPL HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC MYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLT EECCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEEEE GKTFELVPGDGEPRKEFIVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQ CCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCCEEEECCHHHH VIDRKLTSKGVTFTVAIEPQHRDLVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG HHHHHHHCCCCEEEEEECCCCCHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHHCCC IRILPGDKGAMKPSYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEV EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEEECC GEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALK CCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHHHH GAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDI CCEEECCCCCCCCHHCCCCCEEEEECCHHHHHCCCEEEEEEECCCCEEECCCEEEECCCC GQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN CCEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHCCCEE VEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMT ECCCCCCCCCCCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCEE LGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAF EECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEECCCCCCEEECCCHHHHHHCCEEE ATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK ECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC >Mature Secondary Structure SQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADGIV CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCC PGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGV CCCCCCEECCEEECEEEECCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHCCC SGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSLVY CCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCEEE FRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL EEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEH ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPL HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC MYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLT EECCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEEEE GKTFELVPGDGEPRKEFIVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQ CCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCCEEEECCHHHH VIDRKLTSKGVTFTVAIEPQHRDLVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG HHHHHHHCCCCEEEEEECCCCCHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHHCCC IRILPGDKGAMKPSYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEV EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEEECC GEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALK CCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHHHH GAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDI CCEEECCCCCCCCHHCCCCCEEEEECCHHHHHCCCEEEEEEECCCCEEECCCEEEECCCC GQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN CCEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHCCCEE VEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMT ECCCCCCCCCCCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCEE LGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAF EECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEECCCCCCEEECCCHHHHHHCCEEE ATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK ECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]