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The map label for this gene is fliC [H]

Identifier: 218548540

GI number: 218548540

Start: 1211032

End: 1212564

Strand: Direct

Name: fliC [H]

Synonym: EFER_1170

Alternate gene names: 218548540

Gene position: 1211032-1212564 (Clockwise)

Preceding gene: 218548535

Following gene: 218548541

Centisome position: 26.39

GC content: 41.68

Gene sequence:

>1533_bases
GTGGTATTTGATAAGGAAAAAATCATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAA
TAAATCTCAGTCTTCTCTGAGCTCCGCCATTGAACGTCTCTCTTCTGGCCTGCGTATTAACAGTGCTAAAGATGACGCAG
CAGGTCAGGCGATTGCTAACCGTTTTACGGCAAATATTAAAGGTCTGACTCAGGCTTCCCGTAACGCGAATGATGGTATT
TCTATCGCGCAGACCACTGAAGGTGCGTTAAACGAAATTAACAATAACCTGCAACGTGTACGTGAACTGTCAGTACAGGC
AACTAACGGTACTAACTCTGGTTCTGATCTGAAATCAATTCAGGATGAAATTCAACAGCGTCTTGAGGAGATCGATCGCG
TTTCCAACCAAACTCAGTTTAACGGCGTTAAAGTCCTGTCTCAGGACAATCAAATGAAAATTCAGGTTGGTGCTAATGAT
GGAGAAACCATCACAATCGATCTTAAGAAAATTGATGTCAAGAGCTTAGGTTTAGACGGTTTTAATATTAATGGACCTAA
ACAAGCTACAGCAGGTGATCTCAAATCTAGTTTCAAAAATGTAACTGGTTTTGATACTTATAATGTTGGGGGGAATGAAT
ATCGCGTTGATATTAATTCTGGAGAAGTTACAGGTAACAATGGTGCTGATAAAACGTATGTCAGCTCGAAAAATGGTCAG
TTAACTGATAAAAACGAAGAAGCTAATGGCAAGACCTTTTTCTCAAAGACTGCGTCAGGTACTGGTGATGCTAATGCACA
GGCAATTGGTACCGCTATTAAAAATGGCAATGAAGGTGATACATTTGATTATAACGGTCAAACCTTTACTATTGACACTA
AAACTGGTGCCGATGGTAATGGTACTGCGTCAACAATGATCAATGGTGAAAAAGTCACGCTGACTATTAAGGGGGCTGCG
GGAGGCGCTTTAACTGCTGCAACTGTTGAGTCCGATAAAGATGTCTATACATCAGTAACTAATGGCCAGTATACTTTTGA
TGCAACAACGAAAAATGACGCAGCTAAACTTTCAGATTTAGAAGCTAATAATGCAACCAAAGGTACAAGCACCATTACTG
TTAATGGTGCTAACTACACTGCAAATGCAGACGGTAGTAAAATTACTGATAAAGATGGTAAAGTCATGTATATGGATAAA
ACACCATCTGGTATCAGCACTCTGATTAATGAAGACGTTGCAGATTCTAAAAAAAGCACATCTAGTCCATTAGCTGCAAT
TGACGCTGCACTATCTAAAGTTGATGCTGTTCGTTCTTCTTTGGGTGCAATTCAAAACCGTTTCGACTCTGCCATCACCA
ACCTTGGCAACACCGTAAACAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTACGCGACCGAAGTGTCTAAC
ATGTCTCGTGCGCAGATCCTGCAACAAGCAGGTACTTCTGTTCTGGCACAGGCTAACCAGACCACGCAGAACGTACTGTC
TCTGCTGCGTTAA

Upstream 100 bases:

>100_bases
GCAGGTAATTCGGCGAGTAAAAATTTTCTAAAGTTCGAAATTCAGGTGCCGATACAAGGGTTACGGTGAGAAACCGTGGG
CAACAGCCCAATAACATCAA

Downstream 100 bases:

>100_bases
TCGCCGCTATATTCTTCCAAACCCCGCTCCGGCGGGGTTTTTTCTAGCAGGCAAATAGCCGTAACCTGCAAATAACCCCC
CATTTCACCCACTATTCATC

Product: Flagellin

Products: NA

Alternate protein names: Phase 1-I flagellin [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MVFDKEKIMAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGI
SIAQTTEGALNEINNNLQRVRELSVQATNGTNSGSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGAND
GETITIDLKKIDVKSLGLDGFNINGPKQATAGDLKSSFKNVTGFDTYNVGGNEYRVDINSGEVTGNNGADKTYVSSKNGQ
LTDKNEEANGKTFFSKTASGTGDANAQAIGTAIKNGNEGDTFDYNGQTFTIDTKTGADGNGTASTMINGEKVTLTIKGAA
GGALTAATVESDKDVYTSVTNGQYTFDATTKNDAAKLSDLEANNATKGTSTITVNGANYTANADGSKITDKDGKVMYMDK
TPSGISTLINEDVADSKKSTSSPLAAIDAALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSN
MSRAQILQQAGTSVLAQANQTTQNVLSLLR

Sequences:

>Translated_510_residues
MVFDKEKIMAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGI
SIAQTTEGALNEINNNLQRVRELSVQATNGTNSGSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGAND
GETITIDLKKIDVKSLGLDGFNINGPKQATAGDLKSSFKNVTGFDTYNVGGNEYRVDINSGEVTGNNGADKTYVSSKNGQ
LTDKNEEANGKTFFSKTASGTGDANAQAIGTAIKNGNEGDTFDYNGQTFTIDTKTGADGNGTASTMINGEKVTLTIKGAA
GGALTAATVESDKDVYTSVTNGQYTFDATTKNDAAKLSDLEANNATKGTSTITVNGANYTANADGSKITDKDGKVMYMDK
TPSGISTLINEDVADSKKSTSSPLAAIDAALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSN
MSRAQILQQAGTSVLAQANQTTQNVLSLLR
>Mature_510_residues
MVFDKEKIMAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGI
SIAQTTEGALNEINNNLQRVRELSVQATNGTNSGSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGAND
GETITIDLKKIDVKSLGLDGFNINGPKQATAGDLKSSFKNVTGFDTYNVGGNEYRVDINSGEVTGNNGADKTYVSSKNGQ
LTDKNEEANGKTFFSKTASGTGDANAQAIGTAIKNGNEGDTFDYNGQTFTIDTKTGADGNGTASTMINGEKVTLTIKGAA
GGALTAATVESDKDVYTSVTNGQYTFDATTKNDAAKLSDLEANNATKGTSTITVNGANYTANADGSKITDKDGKVMYMDK
TPSGISTLINEDVADSKKSTSSPLAAIDAALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSN
MSRAQILQQAGTSVLAQANQTTQNVLSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=520, Percent_Identity=50.5769230769231, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 53701; Mature: 53701

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFDKEKIMAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIAN
CCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHH
RFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSGSDLKSI
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHH
QDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLKKIDVKSLGLDG
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEEEEHHHCCCCC
FNINGPKQATAGDLKSSFKNVTGFDTYNVGGNEYRVDINSGEVTGNNGADKTYVSSKNGQ
CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCEEECCCCCCCCEEECCCCC
LTDKNEEANGKTFFSKTASGTGDANAQAIGTAIKNGNEGDTFDYNGQTFTIDTKTGADGN
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCEEEEEECCCCCCCC
GTASTMINGEKVTLTIKGAAGGALTAATVESDKDVYTSVTNGQYTFDATTKNDAAKLSDL
CCEEEEECCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEEECCCCCCHHHHHCC
EANNATKGTSTITVNGANYTANADGSKITDKDGKVMYMDKTPSGISTLINEDVADSKKST
CCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCC
SSPLAAIDAALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MSRAQILQQAGTSVLAQANQTTQNVLSLLR
HHHHHHHHHHCCHHHHHCCHHHHHHHHHHC
>Mature Secondary Structure
MVFDKEKIMAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIAN
CCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHH
RFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSGSDLKSI
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHH
QDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLKKIDVKSLGLDG
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEEEEHHHCCCCC
FNINGPKQATAGDLKSSFKNVTGFDTYNVGGNEYRVDINSGEVTGNNGADKTYVSSKNGQ
CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCEEECCCCCCCCEEECCCCC
LTDKNEEANGKTFFSKTASGTGDANAQAIGTAIKNGNEGDTFDYNGQTFTIDTKTGADGN
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECCEEEEEECCCCCCCC
GTASTMINGEKVTLTIKGAAGGALTAATVESDKDVYTSVTNGQYTFDATTKNDAAKLSDL
CCEEEEECCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEEECCCCCCHHHHHCC
EANNATKGTSTITVNGANYTANADGSKITDKDGKVMYMDKTPSGISTLINEDVADSKKST
CCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCC
SSPLAAIDAALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MSRAQILQQAGTSVLAQANQTTQNVLSLLR
HHHHHHHHHHCCHHHHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8146152; 7690024 [H]