| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548506
Identifier: 218548506
GI number: 218548506
Start: 1176461
End: 1177081
Strand: Direct
Name: 218548506
Synonym: EFER_1135
Alternate gene names: NA
Gene position: 1176461-1177081 (Clockwise)
Preceding gene: 218548505
Following gene: 218548507
Centisome position: 25.64
GC content: 50.24
Gene sequence:
>621_bases GTGTGTTATCCCTTGCGGATTATTAGCTATTGCTTTTTCGGAGGTGAAGATATGAACAAGAACCATCTGTTTTTAGGTAT GGCGAGTTTTTTCCTGTTACACCTTCCTTTAGCAATTGCCGTAACCAGTAGCGGTACGGTGGGGGTGACGTTGACGCTGA CTAACGGCTGCCTTATCAATGGCTCGCCCAGTCAGAATGGTATCAATTTTGGGACACTCGATTTTGGTACACATCCGGCG ACATTCTCTACCCTGACCACTCAACTCAGCGGAGCCAGTGGTGGTAATAGTTTTACCATCCAGTGCACAACAGCCGACTA TACGGTGGAGGTGACAGGTAATACCAACGCCACTGCACCGGGAACGGTTATCGGTACGCCTGGCACACCGGGGCGCTATT TGATTAATGCCGCAGATAACACTCAGGGCGTTGCCTACAGCCTGTATAGCGACAGTGGTTATAGCAACGTCATCAGCAAT AACACACCGATTCCTGTCGCCTCCAGCACCGGGGGTGTCGATAACTACACCTTGTATGGGCGTATTCAGGGCGGTGGCAA TAGCGTAACGGTCGTTCCCGGTACATATACTGATACGGTCAATGTCAGCGTAACTTACTGA
Upstream 100 bases:
>100_bases GATGAAATATCTGATAAAACCCTGTCAATCATCCATACGCATGAATAAGCGCAACATGGGTGGTTGAATTCCCCGCCGTA AACTAAATTTCAGATTATCA
Downstream 100 bases:
>100_bases TTTGTCATAATAATGAAAAAACCGACATGCCCCCTGTCAGGGGGCGGTGGCTTGTTTCGCCTGAGTTATGCCGTGCTAAT GTTAACCGCCGTGCAAGGGC
Product: Type I pilus protein CsuA/B
Products: NA
Alternate protein names: Type I Pilus Protein CsuA/B; Type I Pili; Fimbrial Subunit; Fimbrial Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MCYPLRIISYCFFGGEDMNKNHLFLGMASFFLLHLPLAIAVTSSGTVGVTLTLTNGCLINGSPSQNGINFGTLDFGTHPA TFSTLTTQLSGASGGNSFTIQCTTADYTVEVTGNTNATAPGTVIGTPGTPGRYLINAADNTQGVAYSLYSDSGYSNVISN NTPIPVASSTGGVDNYTLYGRIQGGGNSVTVVPGTYTDTVNVSVTY
Sequences:
>Translated_206_residues MCYPLRIISYCFFGGEDMNKNHLFLGMASFFLLHLPLAIAVTSSGTVGVTLTLTNGCLINGSPSQNGINFGTLDFGTHPA TFSTLTTQLSGASGGNSFTIQCTTADYTVEVTGNTNATAPGTVIGTPGTPGRYLINAADNTQGVAYSLYSDSGYSNVISN NTPIPVASSTGGVDNYTLYGRIQGGGNSVTVVPGTYTDTVNVSVTY >Mature_206_residues MCYPLRIISYCFFGGEDMNKNHLFLGMASFFLLHLPLAIAVTSSGTVGVTLTLTNGCLINGSPSQNGINFGTLDFGTHPA TFSTLTTQLSGASGGNSFTIQCTTADYTVEVTGNTNATAPGTVIGTPGTPGRYLINAADNTQGVAYSLYSDSGYSNVISN NTPIPVASSTGGVDNYTLYGRIQGGGNSVTVVPGTYTDTVNVSVTY
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21290; Mature: 21290
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCYPLRIISYCFFGGEDMNKNHLFLGMASFFLLHLPLAIAVTSSGTVGVTLTLTNGCLIN CCCHHEEEEEEEECCCCCCCCEEEEEHHHHHHHHCCEEEEEECCCCEEEEEEEECCEEEE GSPSQNGINFGTLDFGTHPATFSTLTTQLSGASGGNSFTIQCTTADYTVEVTGNTNATAP CCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCC GTVIGTPGTPGRYLINAADNTQGVAYSLYSDSGYSNVISNNTPIPVASSTGGVDNYTLYG CCEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCEEECCCCCCCCEEEEE RIQGGGNSVTVVPGTYTDTVNVSVTY EEECCCCEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MCYPLRIISYCFFGGEDMNKNHLFLGMASFFLLHLPLAIAVTSSGTVGVTLTLTNGCLIN CCCHHEEEEEEEECCCCCCCCEEEEEHHHHHHHHCCEEEEEECCCCEEEEEEEECCEEEE GSPSQNGINFGTLDFGTHPATFSTLTTQLSGASGGNSFTIQCTTADYTVEVTGNTNATAP CCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCC GTVIGTPGTPGRYLINAADNTQGVAYSLYSDSGYSNVISNNTPIPVASSTGGVDNYTLYG CCEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCEEECCCCCCCCEEEEE RIQGGGNSVTVVPGTYTDTVNVSVTY EEECCCCEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA