| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is otsB [H]
Identifier: 218548497
GI number: 218548497
Start: 1167463
End: 1168266
Strand: Direct
Name: otsB [H]
Synonym: EFER_1126
Alternate gene names: 218548497
Gene position: 1167463-1168266 (Clockwise)
Preceding gene: 218548496
Following gene: 218548498
Centisome position: 25.44
GC content: 51.49
Gene sequence:
>804_bases GTGACCAAACCGTTAACCGAAGCCCCTGAACTTTCCGCTAAATACGCCTGGTTTTTTGATCTTGATGGCACGCTGGCTGA GATCAAACCGCATCCCGACCAGGTGGCGATTCCTGACGCGATTCTGCAAGGTCTTCAGCAACTGGCCGTCCATAGCGACG GTGCGCTGGCATTGATTTCAGGGCGCTCAATGGTTGAGCTTGATACGCTGGCTAAACCATATCGTTTTCCCCTTGCCGGA GTGCATGGAGCAGAACGCCGTGACATCAATGGTAAAACGCATATTGTGCGTCTGCCTGACGCCATGGTCCGGGATATCAG CGTGCAGCTGCATACGACGCTGGCAGGCTTAACCGGAGTGGAGATTGAAGAAAAAGGGATGGCGTTTGCCCTGCATTACC GCCAGGCACCGCAGCATGAAGCGCTGTTATTTACTCTGGCGCAGCGTATTACACAAATCTGGCCGCAAATGGCGCTTCAG CAAGGCAAATGTGTGGTTGAAATTAAACCACGTGGCACCTGTAAAGGTGATGCCATTGCAGAATTTATGCAGGAGACCCC GTTTGTTGGAAGGATACCGATTTTTTGGGGGGATGATTTAACGGATGAGTCCGGCTTTGCTGTCGTTAATCAGGCGGGAG GCATATCGGTGAAAATAGGGGCAGGTGAGACCCAGGCGAAATGGCGGCTGGCGGGCGTGCCAGATGTCTGGCGCTGGCTT GCAGTAATAACCAACTCATTACAAGAACAAAAATTAGAAGAGAACAGGAGTGATGATTATGAGTCGTTTAGTCGTAGTAT CTAA
Upstream 100 bases:
>100_bases TCATCTTATGCCAATGGCGAGCCTCTTCTCACTGTCTATACTTACATGTCTGTAAGGCGCGTTCTGCGCGAAATAAAACA AGATAAAGGAGGAGGAACGG
Downstream 100 bases:
>100_bases CCGTATTGCCCCACCTGATGAGCATGCCGCCAGTGCTGGTGGTCTTGCCGTTGGTATACTGGGCGCATTGAAGGCTGCAG GGGGGTTATGGTTTGGCTGG
Product: trehalose-6-phosphate phosphatase
Products: NA
Alternate protein names: TPP; Osmoregulatory trehalose synthesis protein B; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTKPLTEAPELSAKYAWFFDLDGTLAEIKPHPDQVAIPDAILQGLQQLAVHSDGALALISGRSMVELDTLAKPYRFPLAG VHGAERRDINGKTHIVRLPDAMVRDISVQLHTTLAGLTGVEIEEKGMAFALHYRQAPQHEALLFTLAQRITQIWPQMALQ QGKCVVEIKPRGTCKGDAIAEFMQETPFVGRIPIFWGDDLTDESGFAVVNQAGGISVKIGAGETQAKWRLAGVPDVWRWL AVITNSLQEQKLEENRSDDYESFSRSI
Sequences:
>Translated_267_residues MTKPLTEAPELSAKYAWFFDLDGTLAEIKPHPDQVAIPDAILQGLQQLAVHSDGALALISGRSMVELDTLAKPYRFPLAG VHGAERRDINGKTHIVRLPDAMVRDISVQLHTTLAGLTGVEIEEKGMAFALHYRQAPQHEALLFTLAQRITQIWPQMALQ QGKCVVEIKPRGTCKGDAIAEFMQETPFVGRIPIFWGDDLTDESGFAVVNQAGGISVKIGAGETQAKWRLAGVPDVWRWL AVITNSLQEQKLEENRSDDYESFSRSI >Mature_266_residues TKPLTEAPELSAKYAWFFDLDGTLAEIKPHPDQVAIPDAILQGLQQLAVHSDGALALISGRSMVELDTLAKPYRFPLAGV HGAERRDINGKTHIVRLPDAMVRDISVQLHTTLAGLTGVEIEEKGMAFALHYRQAPQHEALLFTLAQRITQIWPQMALQQ GKCVVEIKPRGTCKGDAIAEFMQETPFVGRIPIFWGDDLTDESGFAVVNQAGGISVKIGAGETQAKWRLAGVPDVWRWLA VITNSLQEQKLEENRSDDYESFSRSI
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=267, Percent_Identity=83.1460674157303, Blast_Score=458, Evalue=1e-130, Organism=Drosophila melanogaster, GI19920676, Length=254, Percent_Identity=26.7716535433071, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221473368, Length=248, Percent_Identity=27.8225806451613, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI20129307, Length=248, Percent_Identity=27.8225806451613, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24582490, Length=248, Percent_Identity=27.8225806451613, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 29512; Mature: 29381
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPLTEAPELSAKYAWFFDLDGTLAEIKPHPDQVAIPDAILQGLQQLAVHSDGALALIS CCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEC GRSMVELDTLAKPYRFPLAGVHGAERRDINGKTHIVRLPDAMVRDISVQLHTTLAGLTGV CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEEEEHHHHCCCCC EIEEKGMAFALHYRQAPQHEALLFTLAQRITQIWPQMALQQGKCVVEIKPRGTCKGDAIA EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH EFMQETPFVGRIPIFWGDDLTDESGFAVVNQAGGISVKIGAGETQAKWRLAGVPDVWRWL HHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCHHHHHHH AVITNSLQEQKLEENRSDDYESFSRSI HHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure TKPLTEAPELSAKYAWFFDLDGTLAEIKPHPDQVAIPDAILQGLQQLAVHSDGALALIS CCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEC GRSMVELDTLAKPYRFPLAGVHGAERRDINGKTHIVRLPDAMVRDISVQLHTTLAGLTGV CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEEEEHHHHCCCCC EIEEKGMAFALHYRQAPQHEALLFTLAQRITQIWPQMALQQGKCVVEIKPRGTCKGDAIA EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH EFMQETPFVGRIPIFWGDDLTDESGFAVVNQAGGISVKIGAGETQAKWRLAGVPDVWRWL HHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCHHHHHHH AVITNSLQEQKLEENRSDDYESFSRSI HHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8045430; 9097040; 9278503 [H]