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The map label for this gene is yfcR [H]

Identifier: 218548210

GI number: 218548210

Start: 846519

End: 847034

Strand: Direct

Name: yfcR [H]

Synonym: EFER_0828

Alternate gene names: 218548210

Gene position: 846519-847034 (Clockwise)

Preceding gene: 218548209

Following gene: 218548211

Centisome position: 18.45

GC content: 50.97

Gene sequence:

>516_bases
ATGAAATACACGTTTCTGGTGGGAACGGGCATTTTTCTCCTGAGCGGCTGGCTGATGGGGAGCCTTGCCGTGGCAGGGGA
AAGTAGACCGGTGCTATTGACGTTGCACGTTTTGGTGGATGGGCCACCGCCCTGTTCCGTGAAGGGGAGCAATGTGCAAT
TTGGCGATGTATACATTAGCAAAATCAATGGCACGAATTACCGCACCACGGAGCCGCTTTATACCCTGAACTGTGGTAAC
AGGGCGGTGGGTGTTGATGATCTGCGGTTGCAGCTTAAAGGCACCACTACCGTTATTAACGGGGAAACTGTCATTGCGAC
GGAAATACCCGGCCTGGGCATTCGCATTGAAAACGGTGCCGATAACTCTTTATTTAGAGTGGGTGAAGGTAACTGGTCTG
ATTTTAATGTTAACCAGTTGCCCAATCTCAAAGCGGTGCCGGTAAAACAGAGTGGAGCGCAGCTTACGCCAGCGGAATTT
AACGCCAGTATGACGATGGTGGTGGATTACCAATGA

Upstream 100 bases:

>100_bases
CGACTACGGCGCGCGATTGTCGCTGAACTTTAAATGCAATGGCAATAATTGCCAGGTGGATGCAGAGCAAAGCCGCAAAG
GCTGATGCCGGGAGAGTCTT

Downstream 100 bases:

>100_bases
AAAAACGCTTGTTCTTTTTACTCTGCACCTGCGGTGGTGTTGCGCTGGCGGCTGACGATGACATCACTTTTCACGGTACG
CTGGTGGCACCGCCTGTCTG

Product: fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKYTFLVGTGIFLLSGWLMGSLAVAGESRPVLLTLHVLVDGPPPCSVKGSNVQFGDVYISKINGTNYRTTEPLYTLNCGN
RAVGVDDLRLQLKGTTTVINGETVIATEIPGLGIRIENGADNSLFRVGEGNWSDFNVNQLPNLKAVPVKQSGAQLTPAEF
NASMTMVVDYQ

Sequences:

>Translated_171_residues
MKYTFLVGTGIFLLSGWLMGSLAVAGESRPVLLTLHVLVDGPPPCSVKGSNVQFGDVYISKINGTNYRTTEPLYTLNCGN
RAVGVDDLRLQLKGTTTVINGETVIATEIPGLGIRIENGADNSLFRVGEGNWSDFNVNQLPNLKAVPVKQSGAQLTPAEF
NASMTMVVDYQ
>Mature_171_residues
MKYTFLVGTGIFLLSGWLMGSLAVAGESRPVLLTLHVLVDGPPPCSVKGSNVQFGDVYISKINGTNYRTTEPLYTLNCGN
RAVGVDDLRLQLKGTTTVINGETVIATEIPGLGIRIENGADNSLFRVGEGNWSDFNVNQLPNLKAVPVKQSGAQLTPAEF
NASMTMVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=171, Percent_Identity=59.0643274853801, Blast_Score=198, Evalue=2e-52,
Organism=Escherichia coli, GI1788675, Length=146, Percent_Identity=37.6712328767123, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18349; Mature: 18349

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTFLVGTGIFLLSGWLMGSLAVAGESRPVLLTLHVLVDGPPPCSVKGSNVQFGDVYIS
CEEEEEEECHHHHHHHHHHEEEEECCCCCCEEEEEEEEECCCCCCCEECCCEEECEEEEE
KINGTNYRTTEPLYTLNCGNRAVGVDDLRLQLKGTTTVINGETVIATEIPGLGIRIENGA
EECCCCCEECCCEEEEECCCEEECCCEEEEEEECCEEEEECCEEEEEECCCCEEEEECCC
DNSLFRVGEGNWSDFNVNQLPNLKAVPVKQSGAQLTPAEFNASMTMVVDYQ
CCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCEECHHHCCCEEEEEEEEC
>Mature Secondary Structure
MKYTFLVGTGIFLLSGWLMGSLAVAGESRPVLLTLHVLVDGPPPCSVKGSNVQFGDVYIS
CEEEEEEECHHHHHHHHHHEEEEECCCCCCEEEEEEEEECCCCCCCEECCCEEECEEEEE
KINGTNYRTTEPLYTLNCGNRAVGVDDLRLQLKGTTTVINGETVIATEIPGLGIRIENGA
EECCCCCEECCCEEEEECCCEEECCCEEEEEEECCEEEEECCEEEEEECCCCEEEEECCC
DNSLFRVGEGNWSDFNVNQLPNLKAVPVKQSGAQLTPAEFNASMTMVVDYQ
CCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCEECHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]