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The map label for this gene is yfdM [H]

Identifier: 218547983

GI number: 218547983

Start: 600213

End: 600899

Strand: Direct

Name: yfdM [H]

Synonym: EFER_0589

Alternate gene names: 218547983

Gene position: 600213-600899 (Clockwise)

Preceding gene: 218547982

Following gene: 218547984

Centisome position: 13.08

GC content: 54.29

Gene sequence:

>687_bases
GTGGTATCTGTCAGGGAATTACGTGGGGGCTTAATGAGTAATAAATATTGCCAGGCGCTGGTGGAGCTGCGGAACAAACC
AGGCCATGAACTGAAGGAAGTGGGCGATCAGTGGCGCACGCCGGACAACATTTTCTGGGGAATTAACACCCTGTTTGGCC
CGTTTGTTCTGGATCTGTTCACTGATGGTGATAACGCCAAATGTGCCGCTTATTACACTGCGGAAGACAACGCGCTGGCG
CATGACTGGTCAGAACGTCTTGCGGAGCTTAAAGGTGCTGCCTTTGGTAATCCCCCATACAGCCGCGCCAGTCAGCATGA
GGGGCAATACATCACCGGCATGCGTTACATCATGAAACATGCCAGTGCCATGCGTGATAAGGGCGGGCGCTATGTTTTCC
TGATCAAAGCTGCCACCAGCGAAGTGTGGTGGCCGGAAGGTGCGGACCATATTGCTTTTATTCGCGGGCGTATTGGTTTT
GAACTGCCTGCCTGGTTTATCCCGAAGGACGAGAAGCAGGTGCCGACAGGAGCGTTCTTCGCTGGTGCTATTGCTGTTTT
CGATAAGACCTGGAAGGGGCCGGCAATCAGCTACATCGGGCGCGATGAACTTGAGGCATGTGGTGAGGCGTTTCTGGCGC
AGGTTCGCCAGCAGGCAGAAAAACTGGTCAGGGAGATGGCGGCATGA

Upstream 100 bases:

>100_bases
CATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTCTGGCGCATCGTGAGCGGTGCTTACGGCAAAGCAGCAAG
CGCTCTGCATCGGGTGAAGA

Downstream 100 bases:

>100_bases
CGACGTTAACTCAATGCCAGCAGCAGGTGCTGGATATGCTGATTTCTTACCAGAAAGAACGTGGCTTCCCGCCAACCAAT
CAGGAGGTGGCAACCATGCT

Product: phage AdoMet-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVSVRELRGGLMSNKYCQALVELRNKPGHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALA
HDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEGADHIAFIRGRIGF
ELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA

Sequences:

>Translated_228_residues
MVSVRELRGGLMSNKYCQALVELRNKPGHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALA
HDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEGADHIAFIRGRIGF
ELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA
>Mature_228_residues
MVSVRELRGGLMSNKYCQALVELRNKPGHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALA
HDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEGADHIAFIRGRIGF
ELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008593 [H]

Pfam domain/function: PF05869 Dam [H]

EC number: NA

Molecular weight: Translated: 25570; Mature: 25570

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVRELRGGLMSNKYCQALVELRNKPGHELKEVGDQWRTPDNIFWGINTLFGPFVLDLF
CCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKH
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ASAMRDKGGRYVFLIKAATSEVWWPEGADHIAFIRGRIGFELPAWFIPKDEKQVPTGAFF
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHH
AGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA
HHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSVRELRGGLMSNKYCQALVELRNKPGHELKEVGDQWRTPDNIFWGINTLFGPFVLDLF
CCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKH
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ASAMRDKGGRYVFLIKAATSEVWWPEGADHIAFIRGRIGFELPAWFIPKDEKQVPTGAFF
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHH
AGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA
HHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 3532033 [H]