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The map label for this gene is yfdN [H]

Identifier: 218547982

GI number: 218547982

Start: 599752

End: 600246

Strand: Direct

Name: yfdN [H]

Synonym: EFER_0588

Alternate gene names: 218547982

Gene position: 599752-600246 (Clockwise)

Preceding gene: 218547981

Following gene: 218547983

Centisome position: 13.07

GC content: 54.75

Gene sequence:

>495_bases
GTGATCATGAGTCTGTTAAATGACGTTCAGAAATTCATTGAAGCCCATCCGGGGTGTACTTCCGGAGACATTGCGGATGC
TTTTGCTGGTTACTCACGGCAGCGCGTTCTGCAGTCAGCAAGCAAGTTACGTCAGAGTGGGCGTGTGGCTCACCGTTGTG
AAGGAGATACACGCAGACATTTCCCGCGCCTGACTGAGAGAGCGCAGGAGCCGAAACCACAACCAGTTCGTGAAACCAGA
CCTGTGCGTAATTTCTATGTCGGCACTAACGACCCCCGGGTGATTTTGTGCCTGACCCGCCAGGCTGAAGAACTGGAGTC
CAGGGGCTTATTCCGTCGAGCCGCAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATT
TTCTGGCGCATCGTGAGCGGTGCTTACGGCAAAGCAGCAAGCGCTCTGCATCGGGTGAAGAGTGGTATCTGTCAGGGAAT
TACGTGGGGGCTTAA

Upstream 100 bases:

>100_bases
CGCCGTCCGTAAGCACGTACACCGAAAAACGCGAAGACCCGTACTTCAAATCCAGTTACGACAACGTGGACTACAGCCAG
ATCCCGGCAGGATTCAGGGG

Downstream 100 bases:

>100_bases
TGAGTAATAAATATTGCCAGGCGCTGGTGGAGCTGCGGAACAAACCAGGCCATGAACTGAAGGAAGTGGGCGATCAGTGG
CGCACGCCGGACAACATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRHFPRLTERAQEPKPQPVRETR
PVRNFYVGTNDPRVILCLTRQAEELESRGLFRRAATVWMAAFRESHSQPERNNFLAHRERCLRQSSKRSASGEEWYLSGN
YVGA

Sequences:

>Translated_164_residues
MIMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRHFPRLTERAQEPKPQPVRETR
PVRNFYVGTNDPRVILCLTRQAEELESRGLFRRAATVWMAAFRESHSQPERNNFLAHRERCLRQSSKRSASGEEWYLSGN
YVGA
>Mature_164_residues
MIMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRHFPRLTERAQEPKPQPVRETR
PVRNFYVGTNDPRVILCLTRQAEELESRGLFRRAATVWMAAFRESHSQPERNNFLAHRERCLRQSSKRSASGEEWYLSGN
YVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788699, Length=164, Percent_Identity=95.1219512195122, Blast_Score=326, Evalue=4e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020344
- ProDom:   PD096295 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18805; Mature: 18805

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRH
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHH
FPRLTERAQEPKPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLFRRAATVWMA
HHHHHHHHCCCCCCCCHHCCCCHHEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AFRESHSQPERNNFLAHRERCLRQSSKRSASGEEWYLSGNYVGA
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MIMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRH
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHH
FPRLTERAQEPKPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLFRRAATVWMA
HHHHHHHHCCCCCCCCHHCCCCHHEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AFRESHSQPERNNFLAHRERCLRQSSKRSASGEEWYLSGNYVGA
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 3532033 [H]