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The map label for this gene is ygaP [H]

Identifier: 218547817

GI number: 218547817

Start: 416273

End: 416797

Strand: Reverse

Name: ygaP [H]

Synonym: EFER_0404

Alternate gene names: 218547817

Gene position: 416797-416273 (Counterclockwise)

Preceding gene: 218547818

Following gene: 218547815

Centisome position: 9.08

GC content: 46.29

Gene sequence:

>525_bases
ATGGCTTTGACAACCATTTCGCCGCATGATGCACAAGAATTAATCGCACGCGGCGCAAAGTTAATCGATATTCGTGATGC
TGATGAATATCTTCGTGAACATATTCCTGAAGCAGATCTGGCTCCATTATCCGTGCTCGAACAGTCAGGTCTTCCGGCTA
AATTACGTCGCGAGCAAATTATATTCCACTGCCAGGCAGGTAAACGCACCAGTAATAACGCCGATAAATTAGCAGCGATT
GCCGCCCCCGCAGAAATCTTTTTACTCGAAGATGGGATTGATGGCTGGAAAAAAGCAGGATTGCCAGTAGCGGTAAATAA
ATCTCAACCCTTGCCGTTAATGCGCCAGGTGCAGATCGCCGCGGGTGGTTTAATATTAATCGGTGTTGTACTGGGTTATA
CCGTAAATAGCGGTTTCTTCTTATTAAGCGGCTTTGTTGGTGCCGGGTTACTGTTTGCAGGAATTAGCGGTTTTTGTGGG
ATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCATCAAGCTTGA

Upstream 100 bases:

>100_bases
CCAACGGGATGCCCAACGCATTCTATATTCCATTAAAAATGAGGCGGTAAATGCCATTATCGCCACCCTGAAAAATGTCT
ATTGTCCGTAAGGAGTCACT

Downstream 100 bases:

>100_bases
GAAGCGACGCCGGACGCGCCATAGCAGCGGCATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCCTCT
GCCAGCGCCTGAGCAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRREQIIFHCQAGKRTSNNADKLAAI
AAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
MARLLDKMPWNHQA

Sequences:

>Translated_174_residues
MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRREQIIFHCQAGKRTSNNADKLAAI
AAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
MARLLDKMPWNHQA
>Mature_173_residues
ALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRREQIIFHCQAGKRTSNNADKLAAIA
APAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGM
ARLLDKMPWNHQA

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr1261 [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=174, Percent_Identity=98.2758620689655, Blast_Score=345, Evalue=7e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 18639; Mature: 18508

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRREQI
CCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHEE
IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIA
EEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHH
AGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNHQA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRREQI
CCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHEE
IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIA
EEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHH
AGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNHQA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1480493 [H]