| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yaeT [H]
Identifier: 218547632
GI number: 218547632
Start: 219415
End: 221823
Strand: Direct
Name: yaeT [H]
Synonym: EFER_0199
Alternate gene names: 218547632
Gene position: 219415-221823 (Clockwise)
Preceding gene: 218547631
Following gene: 218547633
Centisome position: 4.78
GC content: 47.07
Gene sequence:
>2409_bases ATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGTTTAGCAGCGCCACCGTATACGGTGCTGAAGGGTTCGTAGTGAA AGATATTCATTTCGAAGGCCTACAGCGTGTCGCCGTTGGTGCGGCCCTCCTCAGTATGCCGGTGCGCACAGGCGACACGG TTAATGATGAAGATATCAGTAATACCATACGCGCACTGTTTGCCACTGGTAACTTTGAGGATGTCCGTGTCCTTCGTGAT GGTGATACTCTTCTGGTTCAGGTCAAAGAACGCCCGACAATTGCCAGCATCACTTTCTCCGGTAACAAATCGGTGAAAGA TGACATGCTGAAGCAAAACCTGGAGGCTTCTGGCGTGCGTGTGGGCGAATCTCTCGATCGCACTACCATTGCTGATATCG AAAAAGGTCTGGAAGATTTCTACTATAGCGTCGGTAAATATAGCGCCAGCGTAAAAGCTGTGGTTACGCCTTTGCCGCGT AACCGTGTCGATCTCAAACTGGTTTTCCAGGAAGGGGTATCGGCAACAATCCAACAGATTAATATTGTTGGTAACCACGC TTTTACTACCAACGAATTGATTTCCCATTTCCAACTGCGTGATGAAGTACCGTGGTGGAACGTGGTGGGGGATCGTAAAT ACCAGAAACAGAAACTGGCAGGCGACCTTGAAACGCTGCGTAGTTATTATCTGGATCGTGGTTATGCGCGTTTCAACATC GATTCTACTCAGGTCAGCCTGACGCCAGATAAAAAAGGTATTTACATCACTGTTAACATTACAGAAGGCGATCAATACAA GCTTTCAGGTGTACAAGTGACAGGTAACCTTGCAGGCCATTCCGCTGAAATCGAAGAATTGACGAAAATCGAGCCGGGTG AACTGTATAACGGCACCAAAGTGACCAAAATGGAAGATGATATTAAAAAGCTTCTGGGTCGCTACGGTTATGCCTATCCG CGTGTACAGTCGATGCCTGAAATTAACGATGCTGACAAAACCGTTAAATTACGTGTGAACGTTGATGCGGGTAACCGTTT CTATGTGCGTAAAATCCGTTTTGAAGGCAACGACACCTCGAAAGATTCAGTTCTGCGTCGTGAAATGCGTCAGATGGAAG GTGCCTGGTTAGGTAGTGATCTGGTTGATCAGGGGAAAGAGCGTCTGAATCGTCTGGGTTACTTTGAAACCGTCGACACT GACACACAACGTGTTCCCGGCAGCCCGGATCAAGTTGACGTAGTTTACAAGGTGAAAGAACGTAACACCGGTAGCTTCAA CTTTGGTATCGGCTACGGTACTGAAAGTGGCGTCAGCTTCCAGATAGGTGTACAGCAAGACAACTGGTTAGGTACAGGTT ATGCAGTGGGTATCAACGGTACCAAAAACGATTACCAGACCTACAGCGAACTGTCTGTTACCAACCCGTATTTTACTGTT GATGGCGTAAGCCTCGGCGGACGTATCTTCTATAATGATTTCCAGGCGGATGATGCTGACCTGTCTGACTATACCAACAA AAGTTATGGTACAGACGTAACGCTCGGCTTCCCGATCAATGAGTATAACTCGCTGCGTGCTGGCCTGGGTTATGTGCATA ACAAACTGTCCAATATGCAGCCACAGGTTGCAATGGATCGTTATCTGGAATCAATGGGTGAATATGGTAAAGACAGCTTT GCTGCTGACGATTTCACCTTTAACTACGGCTGGACATACAACAAACTTGACCGTGGTTATTTCCCGACAGATGGTTCACG CGTAAACCTGACTGGTAAAGTCACTATTCCTGGTTCAGATAACGAATACTACAAATTATCGTTAGACACTGCGACTTATG TACCGATCGATGACGATCATAAATGGGTTGTCCTGGGGCGTACTCGCTGGGGTTATGGTGATGGTATTGGCGGCAAAGAA ATGCCGTTCTATGAGAACTTCTATGCCGGTGGTTCCAGCACTGTGCGTGGCTTCCAGTCCAACACTATTGGTCCGAAAGC GGTCTATAAAAAGGGTGCTCACTCTTCTAATGATGAGTACGATGATTACGAAGAGTGTACTGAGAGTAATGGTTGCCAAT CTGATGACGCCGTGGGTGGTAACGCAATGGCGGTTGCCAGCTTTGAGCTGATCACACCGACACCGTTTATTAGCGAAAAA TATGCTAACTCAGTTCGTACTTCCTTGTTCTGGGATATGGGTACGGTTTGGGATACCAACTGGCAAGCAAGTAGATATCC TGATTATCCAGACTATAGTGATCCAGGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGTCCCCATTGGGGC CGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAAGCAGAACAATTCCAGTTTAACATTGGTAAA ACCTGGTAA
Upstream 100 bases:
>100_bases CGCATTGGCTCGATTTTGCTGGTGCTGTTAATGGGGCTTGCACTTTTCAATGATTTCTCTCGGTTGTAAGAGAGTTAGTT AGGAAGAACGCATAATAACG
Downstream 100 bases:
>100_bases TTGTTCTTCGCAAAGGAATGTAATGGTAGTGTAGCGATGACTTTTGGCGATCCCAATGTGGATCGCCCAGGCCACGCAAA GAACTGCACCTTCGGGTGCA
Product: outer membrane protein assembly factor YaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 802; Mature: 801
Protein sequence:
>802_residues MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRD GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSATIQQINIVGNHAFTTNELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVTGNLAGHSAEIEELTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP RVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGYFETVDT DTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQIGVQQDNWLGTGYAVGINGTKNDYQTYSELSVTNPYFTV DGVSLGGRIFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNKLSNMQPQVAMDRYLESMGEYGKDSF AADDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKLSLDTATYVPIDDDHKWVVLGRTRWGYGDGIGGKE MPFYENFYAGGSSTVRGFQSNTIGPKAVYKKGAHSSNDEYDDYEECTESNGCQSDDAVGGNAMAVASFELITPTPFISEK YANSVRTSLFWDMGTVWDTNWQASRYPDYPDYSDPGNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGK TW
Sequences:
>Translated_802_residues MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRD GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSATIQQINIVGNHAFTTNELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVTGNLAGHSAEIEELTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP RVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGYFETVDT DTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQIGVQQDNWLGTGYAVGINGTKNDYQTYSELSVTNPYFTV DGVSLGGRIFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNKLSNMQPQVAMDRYLESMGEYGKDSF AADDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKLSLDTATYVPIDDDHKWVVLGRTRWGYGDGIGGKE MPFYENFYAGGSSTVRGFQSNTIGPKAVYKKGAHSSNDEYDDYEECTESNGCQSDDAVGGNAMAVASFELITPTPFISEK YANSVRTSLFWDMGTVWDTNWQASRYPDYPDYSDPGNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGK TW >Mature_801_residues AMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDG DTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRN RVDLKLVFQEGVSATIQQINIVGNHAFTTNELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNID STQVSLTPDKKGIYITVNITEGDQYKLSGVQVTGNLAGHSAEIEELTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPR VQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGYFETVDTD TQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQIGVQQDNWLGTGYAVGINGTKNDYQTYSELSVTNPYFTVD GVSLGGRIFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNKLSNMQPQVAMDRYLESMGEYGKDSFA ADDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKLSLDTATYVPIDDDHKWVVLGRTRWGYGDGIGGKEM PFYENFYAGGSSTVRGFQSNTIGPKAVYKKGAHSSNDEYDDYEECTESNGCQSDDAVGGNAMAVASFELITPTPFISEKY ANSVRTSLFWDMGTVWDTNWQASRYPDYPDYSDPGNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGKT W
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=810, Percent_Identity=92.8395061728395, Blast_Score=1530, Evalue=0.0,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 89631; Mature: 89499
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS CCHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHHHEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSATIQQI ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEHHCCHHEEHEE NIVGNHAFTTNELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI EEECCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVTGNLAGHSAEIEELTKIEPGELYNGTK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCE VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGYFETVDTDTQRVPGSPDQVDVVYKVKE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEC RNTGSFNFGIGYGTESGVSFQIGVQQDNWLGTGYAVGINGTKNDYQTYSELSVTNPYFTV CCCCCEEEEEECCCCCCEEEEEECCCCCEECCCEEEECCCCCCHHHHHHHEEECCCEEEE DGVSLGGRIFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNKLSNMQ ECCEECCEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC PQVAMDRYLESMGEYGKDSFAADDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSD HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCEEEEEEEEEECCCC NEYYKLSLDTATYVPIDDDHKWVVLGRTRWGYGDGIGGKEMPFYENFYAGGSSTVRGFQS CCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHCCCCCC NTIGPKAVYKKGAHSSNDEYDDYEECTESNGCQSDDAVGGNAMAVASFELITPTPFISEK CCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHH YANSVRTSLFWDMGTVWDTNWQASRYPDYPDYSDPGNIRMSAGIALQWMSPLGPLVFSYA HHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHH QPFKKYDGDKAEQFQFNIGKTW HHHHHCCCCCCCEEEEECCCCC >Mature Secondary Structure AMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS CHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHHHEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSATIQQI ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEHHCCHHEEHEE NIVGNHAFTTNELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI EEECCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVTGNLAGHSAEIEELTKIEPGELYNGTK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCE VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGYFETVDTDTQRVPGSPDQVDVVYKVKE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEC RNTGSFNFGIGYGTESGVSFQIGVQQDNWLGTGYAVGINGTKNDYQTYSELSVTNPYFTV CCCCCEEEEEECCCCCCEEEEEECCCCCEECCCEEEECCCCCCHHHHHHHEEECCCEEEE DGVSLGGRIFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNKLSNMQ ECCEECCEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC PQVAMDRYLESMGEYGKDSFAADDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSD HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCEEEEEEEEEECCCC NEYYKLSLDTATYVPIDDDHKWVVLGRTRWGYGDGIGGKEMPFYENFYAGGSSTVRGFQS CCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHCCCCCC NTIGPKAVYKKGAHSSNDEYDDYEECTESNGCQSDDAVGGNAMAVASFELITPTPFISEK CCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHH YANSVRTSLFWDMGTVWDTNWQASRYPDYPDYSDPGNIRMSAGIALQWMSPLGPLVFSYA HHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHH QPFKKYDGDKAEQFQFNIGKTW HHHHHCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA