Click here to switch to the map view.

The map label for this gene is htrE [H]

Identifier: 218547595

GI number: 218547595

Start: 174830

End: 177427

Strand: Reverse

Name: htrE [H]

Synonym: EFER_0161

Alternate gene names: 218547595

Gene position: 177427-174830 (Counterclockwise)

Preceding gene: 218547596

Following gene: 218547594

Centisome position: 3.87

GC content: 44.19

Gene sequence:

>2598_bases
GTGCAAAAAATAACAACAACTCATCCTTACAACCTCACGCAGATCGCTACGCTTTGTGCGCTGCTTTATAGTTCCTGTAG
CATAAGTGCTGAACACGTTGAATATGACCACACCTTCCTGATGGGGCGTGATGCTTCAAATATCGACCTTAGTCGGTACA
GTGAAGGTAACCCTACGCTACCCGGTATTTACGACGTAAATGTTTATGTTAATGATCAACCCGTCATTAATCAAAGTATC
CCTTTTGTCGTTATTGACGGGAAGAAAAATGCCCAGGCTTGTATCACCCAGAAGAATATATTGCAGTTTCACATTACCCA
ACCAGATATTCATAGTGAAAATGCGGTACTACTGGAGCGAGATGAAGAACTCGGTGATTGTCTCAATCTGACCGAAATTA
TCCCGCAATCATCTGTGCGCTATGATGTGAATGATCAACGTCTGGATATTGATGTCCCCCAGGCATGGGTCATGAAAAAT
TACCAAAACTATGTTGATCCGTCATTATGGGAAAATGGTATTAATGCTGCCATGCTTTCGTATAACGTTAACGGTTATCA
TAGTGAAAGCCCTGGCAGAAAAAATGACAGCCTTTATGCCTCATTTAATGGTGGTGTGAATTTAGGCGCATGGCGAATGC
GCGCTTCAGGTAACTACAACTGGATGAACGATTCTGGTAGCGATTACAATTTTCAGAATCGGTATTTGCAGCGCGATCTT
GCATCACTACGTTCGCAATTAATTATTGGTGAATCCTATACCACTGGGGAAACTTTTGATTCCGTAAGCATTCGTGGCGT
TCGCTTATACAGCGACAGTCGGATGCTTCCCCCTGCATTAGCCAGTTTTGCTCCGGTTATTCATGGTGTCGCCAACACTA
ACGCAAAAGTGACTATCACTCAGAGCGGTTATAAGATCTATGAAACAACAGTACCACCAGGTGCATTTACTATTGATGAT
CTCAGTCCATCAGGCTATGGCAGCGACCTCATTGTCACGATTGAAGAAGCTGATGGCTCGAAGCGGACTTTCTCTCAGCC
GTTTTCATCGGTAGTGCAAATGCTACGTCCTGGCGTTGGTCGCTGGGATATTAGTGGTGGTCAGGTATTAAAGGACGATA
TTCAGGATGAACCTAATTTATTTCAGGCCAGCTACTACTATGGCCTAAACAACTATCTGACCGCGTATACAGGTATTCAG
CTCACCGATAATAACTATACTGCCGGATTATTGGGACTTGGTTTAAATACGTCCCTGGGTGCTTTTTCTTTCGATGTCAC
TCACTCCAATGTCCGCATCCCTGAAGATAAAACCTACCAGGGGCAGAGCTATCGTTTATCGTGGAACAAATTATTCGAAG
ATACCAGTACGTCGCTAAATATCGCGGCTTACCGCTATTCAACGCAGAATTATCTTGGTCTTAATGACGCTTTAACACTC
ATTGATGAAGTGAAGCATCCAGAGCAAGAGCTTGAACCGCAATCCATGCGTAATTACTCGCGCATGAAAAATCAGGTTAC
GGTCAGTATTAACCAACCGCTGAAATTTGAGAAAAAGGATTACGGCTCCTTTTATCTTTCGGGAAGCTGGTCTGACTATT
GGGCTTCCGGCCAAAATCAAAGCAATTATTCCATTGGCTACAGCAATAGTGCCTCCTGGGGCAGCTATAGCATTAGTGCT
CAGCGTTCCTGGAATGAAGATGGTGAAACCGATGATAGTATCTATCTCAGTTTCACCATTCCAATTGAAAAACTCCTGGG
GACAGAACACCGTGATTCAGGTTTCCAGAATATTGACACTCAGCTAAACAGCGATTTTAAAGGTAATAATCAACTAAATA
TCAGTAGCAGTGGTTACAACGATAACAATCGCATCAGTTACAGTGTGAATACTGGCTATACGATGAATAAATCCACCGAT
GATTTAAGTTATATCGGGGGTTATGCCAGTTATGAATCCCCTTGGGGAACATTGGCCGGTTCGGTTTCCGCAAGTAGTGA
TAATAGCCGTCAGTTTTCGCTCAATACCGACGGTGGTTTTGTGCTGCACAGTGGAGGTCTGACATTCAGTAACGACAGCT
TTAGTGATTCCGACACTCTGGCAGTGGTTCAGGCCCCCGGAGCAAAAGGTGCCCGTATCAACTACGGTAATAGTACTGTA
GATCGCTGGGGCTATGGCGTAACCAGCGCCCTGTCGCCATATCATGAAAACCGCATCGCTCTGGATATTAACGATCTTGA
GAACGATGTTGAATTGAAAAGTACCAGTACTGTTGCCGTACCGCGTCAGGGCTCTGTCATCTTCGCTGGTTTTGAAACGG
TACAGGGGCAATCAGCGATTATGAATATTAAACGTAGCGATGGTCGTAACATTCCATTTGCTGCGGATATTTATGATGAG
CAAGGCAATAATATTGGAAATGTCGGCCAGGGCGGGCAAGCTTTTGTGCGTGGTATCAGTCAACAGGGTAATATCCAGAT
TAAATGGCTCGAAGCGGGTAAGCCCGTAAATTGCCTGGCCCATTATCAACAAAACGCAGAAGCAGAAAAGATCGCACAAA
CGATTATCATCAATGGAATTAATTGTCAGATTCAGTAA

Upstream 100 bases:

>100_bases
CAAAAGTTCATTTCTACGCCATTAATGATTTTGGTGGCGCAATTGAAGGCAATGCAACCCTGTAGTCAGGCAGGGGATAT
AACGCAGCAGGAAGCGAAAC

Downstream 100 bases:

>100_bases
CCACAAGGGCTCCACATGATAAAAATGACACCATATAAATTAACAATACTAATGGGTATATTATTTTCACCATCAGTATT
TGCTACAGATATTAATGTTG

Product: outer membrane usher protein

Products: NA

Alternate protein names: Heat shock protein E [H]

Number of amino acids: Translated: 865; Mature: 865

Protein sequence:

>865_residues
MQKITTTHPYNLTQIATLCALLYSSCSISAEHVEYDHTFLMGRDASNIDLSRYSEGNPTLPGIYDVNVYVNDQPVINQSI
PFVVIDGKKNAQACITQKNILQFHITQPDIHSENAVLLERDEELGDCLNLTEIIPQSSVRYDVNDQRLDIDVPQAWVMKN
YQNYVDPSLWENGINAAMLSYNVNGYHSESPGRKNDSLYASFNGGVNLGAWRMRASGNYNWMNDSGSDYNFQNRYLQRDL
ASLRSQLIIGESYTTGETFDSVSIRGVRLYSDSRMLPPALASFAPVIHGVANTNAKVTITQSGYKIYETTVPPGAFTIDD
LSPSGYGSDLIVTIEEADGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTAYTGIQ
LTDNNYTAGLLGLGLNTSLGAFSFDVTHSNVRIPEDKTYQGQSYRLSWNKLFEDTSTSLNIAAYRYSTQNYLGLNDALTL
IDEVKHPEQELEPQSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNQSNYSIGYSNSASWGSYSISA
QRSWNEDGETDDSIYLSFTIPIEKLLGTEHRDSGFQNIDTQLNSDFKGNNQLNISSSGYNDNNRISYSVNTGYTMNKSTD
DLSYIGGYASYESPWGTLAGSVSASSDNSRQFSLNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNSTV
DRWGYGVTSALSPYHENRIALDINDLENDVELKSTSTVAVPRQGSVIFAGFETVQGQSAIMNIKRSDGRNIPFAADIYDE
QGNNIGNVGQGGQAFVRGISQQGNIQIKWLEAGKPVNCLAHYQQNAEAEKIAQTIIINGINCQIQ

Sequences:

>Translated_865_residues
MQKITTTHPYNLTQIATLCALLYSSCSISAEHVEYDHTFLMGRDASNIDLSRYSEGNPTLPGIYDVNVYVNDQPVINQSI
PFVVIDGKKNAQACITQKNILQFHITQPDIHSENAVLLERDEELGDCLNLTEIIPQSSVRYDVNDQRLDIDVPQAWVMKN
YQNYVDPSLWENGINAAMLSYNVNGYHSESPGRKNDSLYASFNGGVNLGAWRMRASGNYNWMNDSGSDYNFQNRYLQRDL
ASLRSQLIIGESYTTGETFDSVSIRGVRLYSDSRMLPPALASFAPVIHGVANTNAKVTITQSGYKIYETTVPPGAFTIDD
LSPSGYGSDLIVTIEEADGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTAYTGIQ
LTDNNYTAGLLGLGLNTSLGAFSFDVTHSNVRIPEDKTYQGQSYRLSWNKLFEDTSTSLNIAAYRYSTQNYLGLNDALTL
IDEVKHPEQELEPQSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNQSNYSIGYSNSASWGSYSISA
QRSWNEDGETDDSIYLSFTIPIEKLLGTEHRDSGFQNIDTQLNSDFKGNNQLNISSSGYNDNNRISYSVNTGYTMNKSTD
DLSYIGGYASYESPWGTLAGSVSASSDNSRQFSLNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNSTV
DRWGYGVTSALSPYHENRIALDINDLENDVELKSTSTVAVPRQGSVIFAGFETVQGQSAIMNIKRSDGRNIPFAADIYDE
QGNNIGNVGQGGQAFVRGISQQGNIQIKWLEAGKPVNCLAHYQQNAEAEKIAQTIIINGINCQIQ
>Mature_865_residues
MQKITTTHPYNLTQIATLCALLYSSCSISAEHVEYDHTFLMGRDASNIDLSRYSEGNPTLPGIYDVNVYVNDQPVINQSI
PFVVIDGKKNAQACITQKNILQFHITQPDIHSENAVLLERDEELGDCLNLTEIIPQSSVRYDVNDQRLDIDVPQAWVMKN
YQNYVDPSLWENGINAAMLSYNVNGYHSESPGRKNDSLYASFNGGVNLGAWRMRASGNYNWMNDSGSDYNFQNRYLQRDL
ASLRSQLIIGESYTTGETFDSVSIRGVRLYSDSRMLPPALASFAPVIHGVANTNAKVTITQSGYKIYETTVPPGAFTIDD
LSPSGYGSDLIVTIEEADGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTAYTGIQ
LTDNNYTAGLLGLGLNTSLGAFSFDVTHSNVRIPEDKTYQGQSYRLSWNKLFEDTSTSLNIAAYRYSTQNYLGLNDALTL
IDEVKHPEQELEPQSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNQSNYSIGYSNSASWGSYSISA
QRSWNEDGETDDSIYLSFTIPIEKLLGTEHRDSGFQNIDTQLNSDFKGNNQLNISSSGYNDNNRISYSVNTGYTMNKSTD
DLSYIGGYASYESPWGTLAGSVSASSDNSRQFSLNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNSTV
DRWGYGVTSALSPYHENRIALDINDLENDVELKSTSTVAVPRQGSVIFAGFETVQGQSAIMNIKRSDGRNIPFAADIYDE
QGNNIGNVGQGGQAFVRGISQQGNIQIKWLEAGKPVNCLAHYQQNAEAEKIAQTIIINGINCQIQ

Specific function: Probable porin-like protein necessary for the assembly of a pilin-type protein [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=860, Percent_Identity=88.1395348837209, Blast_Score=1596, Evalue=0.0,
Organism=Escherichia coli, GI1788427, Length=821, Percent_Identity=32.8867235079172, Blast_Score=410, Evalue=1e-115,
Organism=Escherichia coli, GI1790772, Length=865, Percent_Identity=31.4450867052023, Blast_Score=396, Evalue=1e-111,
Organism=Escherichia coli, GI1786744, Length=880, Percent_Identity=30.4545454545455, Blast_Score=377, Evalue=1e-105,
Organism=Escherichia coli, GI1787172, Length=861, Percent_Identity=32.520325203252, Blast_Score=377, Evalue=1e-105,
Organism=Escherichia coli, GI1789533, Length=841, Percent_Identity=31.8668252080856, Blast_Score=375, Evalue=1e-105,
Organism=Escherichia coli, GI87081778, Length=853, Percent_Identity=26.8464243845252, Blast_Score=248, Evalue=2e-66,
Organism=Escherichia coli, GI1789610, Length=799, Percent_Identity=24.4055068836045, Blast_Score=146, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 95703; Mature: 95703

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKITTTHPYNLTQIATLCALLYSSCSISAEHVEYDHTFLMGRDASNIDLSRYSEGNPTL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCEEEEEECCCCCCCCEEECCCCCCC
PGIYDVNVYVNDQPVINQSIPFVVIDGKKNAQACITQKNILQFHITQPDIHSENAVLLER
CCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCEEEEEC
DEELGDCLNLTEIIPQSSVRYDVNDQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAMLS
CHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHHHHHHHHHHCCHHHHHCCCCEEEEE
YNVNGYHSESPGRKNDSLYASFNGGVNLGAWRMRASGNYNWMNDSGSDYNFQNRYLQRDL
EECCCEECCCCCCCCCCEEEEECCCCEECEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
ASLRSQLIIGESYTTGETFDSVSIRGVRLYSDSRMLPPALASFAPVIHGVANTNAKVTIT
HHHHHHEEECCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
QSGYKIYETTVPPGAFTIDDLSPSGYGSDLIVTIEEADGSKRTFSQPFSSVVQMLRPGVG
ECCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
RWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTAYTGIQLTDNNYTAGLLGLGLNTSLG
EEECCCCCEEHHHCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCCCCC
AFSFDVTHSNVRIPEDKTYQGQSYRLSWNKLFEDTSTSLNIAAYRYSTQNYLGLNDALTL
EEEEEEECCCEECCCCCCCCCCEEEEEHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHH
IDEVKHPEQELEPQSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNQ
HHHHCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCCC
SNYSIGYSNSASWGSYSISAQRSWNEDGETDDSIYLSFTIPIEKLLGTEHRDSGFQNIDT
CCEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCHHHH
QLNSDFKGNNQLNISSSGYNDNNRISYSVNTGYTMNKSTDDLSYIGGYASYESPWGTLAG
HHCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEECCCCCCHHHHCCCCCCCCCCCCEEC
SVSASSDNSRQFSLNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNSTV
CEECCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEECCCCCH
DRWGYGVTSALSPYHENRIALDINDLENDVELKSTSTVAVPRQGSVIFAGFETVQGQSAI
HHCCCCHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCCEEEEECHHCCCCCEE
MNIKRSDGRNIPFAADIYDEQGNNIGNVGQGGQAFVRGISQQGNIQIKWLEAGKPVNCLA
EEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHH
HYQQNAEAEKIAQTIIINGINCQIQ
HHHCCCCHHHHHHEEEEECEEEEEC
>Mature Secondary Structure
MQKITTTHPYNLTQIATLCALLYSSCSISAEHVEYDHTFLMGRDASNIDLSRYSEGNPTL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCEEEEEECCCCCCCCEEECCCCCCC
PGIYDVNVYVNDQPVINQSIPFVVIDGKKNAQACITQKNILQFHITQPDIHSENAVLLER
CCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCEEEEEC
DEELGDCLNLTEIIPQSSVRYDVNDQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAMLS
CHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHHHHHHHHHHCCHHHHHCCCCEEEEE
YNVNGYHSESPGRKNDSLYASFNGGVNLGAWRMRASGNYNWMNDSGSDYNFQNRYLQRDL
EECCCEECCCCCCCCCCEEEEECCCCEECEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
ASLRSQLIIGESYTTGETFDSVSIRGVRLYSDSRMLPPALASFAPVIHGVANTNAKVTIT
HHHHHHEEECCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
QSGYKIYETTVPPGAFTIDDLSPSGYGSDLIVTIEEADGSKRTFSQPFSSVVQMLRPGVG
ECCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
RWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTAYTGIQLTDNNYTAGLLGLGLNTSLG
EEECCCCCEEHHHCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCCCCC
AFSFDVTHSNVRIPEDKTYQGQSYRLSWNKLFEDTSTSLNIAAYRYSTQNYLGLNDALTL
EEEEEEECCCEECCCCCCCCCCEEEEEHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHH
IDEVKHPEQELEPQSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNQ
HHHHCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCCC
SNYSIGYSNSASWGSYSISAQRSWNEDGETDDSIYLSFTIPIEKLLGTEHRDSGFQNIDT
CCEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCHHHH
QLNSDFKGNNQLNISSSGYNDNNRISYSVNTGYTMNKSTDDLSYIGGYASYESPWGTLAG
HHCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEECCCCCCHHHHCCCCCCCCCCCCEEC
SVSASSDNSRQFSLNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNSTV
CEECCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEECCCCCH
DRWGYGVTSALSPYHENRIALDINDLENDVELKSTSTVAVPRQGSVIFAGFETVQGQSAI
HHCCCCHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCCEEEEECHHCCCCCEE
MNIKRSDGRNIPFAADIYDEQGNNIGNVGQGGQAFVRGISQQGNIQIKWLEAGKPVNCLA
EEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHH
HYQQNAEAEKIAQTIIINGINCQIQ
HHHCCCCHHHHHHEEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8102362; 8202364; 9278503 [H]