| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is secA [H]
Identifier: 218547555
GI number: 218547555
Start: 130244
End: 132949
Strand: Direct
Name: secA [H]
Synonym: EFER_0120
Alternate gene names: 218547555
Gene position: 130244-132949 (Clockwise)
Preceding gene: 218547554
Following gene: 218547556
Centisome position: 2.84
GC content: 49.52
Gene sequence:
>2706_bases ATGCTTATCAAATTATTAACAAAAGTATTCGGTAGCCGTAACGATCGTACGTTGCGTCGTATGCGTAAAGCAGTCAATGT CATCAATGCGATGGAACCGGAGATGGAAAAACTCTCCGATGACGAGCTGAAAGCGAAAACTGCGGAATTCCGCGCCCGTC TGGAAAAAGGTGAAACAGTTGAAAGTCTGATCCCGGAAGCTTTCGCTGTGGTACGTGAAGCCAGTAAACGTGTATTTGGT ATGCGTCACTTCGATGTGCAGCTGCTCGGCGGTATGGTTCTAAACGATCGCTGTATCGCAGAAATGCGTACTGGTGAAGG TAAAACACTGACCGCAACACTGCCTGCCTATCTTAATGCGTTGAGTGGTAAAGGTGTTCACGTAGTTACTGTCAATGACT ATCTGGCCCAGCGTGACGCCGAAAATAACCGTCCGTTGTTTGAGTTCCTTGGCATGACCGTGGGGATCAACCTGCCAGGT ATGCCTGCACCAGCGAAACGTGCGGCGTATGCAGCCGACATTACCTACGGTACAAACAACGAATTCGGCTTCGACTATCT GCGTGACAATATGGCATTTAGTCCGGAAGAGCGCGTACAGCGTAAACTGCATTATGCGCTGGTGGACGAAGTTGACTCCA TTCTCATTGATGAAGCACGTACCCCACTGATCATTTCCGGCCCGGCAGAAGACAGTTCGGAAATGTACAAGAAAGTGAAC AAAATCATCCCGCACCTGATTCGTCAGGAGAAGGAAGATTCGGATACGTTCCAGGGCGAAGGCCACTTCTCGGTTGATGA AAAATCGCGCCAGGTAAACCTGACCGAAAGAGGTCTGGTGTTGATCGAAGAATTACTGGTGAAAGAAGGCATTATGGATG AAGGTGAGTCGTTGTACTCCCCGGCTAACATTATGCTGATGCACCACGTAACAGCGGCACTGCGTGCACATGCCTTGTTT ACCCGTGATGTTGATTACATCGTAAAAGACGGTGAAGTTATCATCGTTGATGAGCATACTGGCCGTACCATGCAAGGGCG TCGTTGGTCTGATGGTTTGCATCAGGCAGTGGAAGCGAAAGAAGGGGTGGAAATCCAGAACGAAAACCAGACGCTGGCTT CTATCACCTTCCAGAACTACTTCCGCTTGTATGAAAAACTGGCAGGTATGACCGGTACAGCGGATACCGAGGCATTCGAA TTCCGTTCTATCTATCGACTGGATACCGTGGTTGTACCGACCAACCGTCCGATGATCCGCAAGGATATGCCGGATCTGGT GTATATGTCGGAAGCCGAGAAAATTCAGGCAATTATCGAAGATATCAAAGAGTGTACAGCGAGAAACCAGCCGGTACTGG TAGGTACTATCTCCATCGAAAAATCGGAGTTGGTGTCTAACGAGCTGACCAAAGCGGGTATCAAACATAACGTTCTGAAC GCCAAATTCCACGCTAACGAAGCTGCTATCGTCGCCCAGGCGGGTTATCCTGGTGCGGTGACCATTGCAACTAACATGGC AGGCCGCGGTACGGATATCGTGCTGGGTGGTAGCTGGCAGGCAGAAGTTGCTGCTCTGGAAAACCCAACACCAGAGCAAA TTGAAGAAATTAAAGCTGCATGGCAGGTTCGCCACGACCAGGTTCTGGCGGCGGGCGGTTTACACATCATTGGTACAGAA CGTCACGAATCACGTCGTATTGATAACCAGTTACGTGGTCGTTCCGGTCGTCAGGGGGATGCGGGTTCTTCGCGTTTCTA CCTGTCGATGGAAGATGCACTGATGCGTATTTTTGCCTCTGATCGCGTTTCCGGCATGATGCGCAAACTGGGTATGAAAC CAGGCGAAGCCATTGAACACCCGTGGGTGACCAAAGCGATTGCTAACGCCCAACGTAAAGTTGAAAGCCGTAACTTCGAT ATTCGTAAGCAGTTGCTGGAATATGATGATGTGGCTAACGATCAGCGTCGCGCAATTTATGCACAGCGTAACGAACTGCT GGATGTCAGCGATGTAAGCGAAACCATCAATAGCATCCGTGAAGATGTCTTTAAAGTCACAATCGACGCTTATATTCCGC CACAATCTCTGGAAGAAATGTGGGATATTCCAGGTTTGCAAGAACGCCTGAAAAACGACTTCGATTTGGATATGCCGATT GCAGAATGGCTGGATAAAGAGCCGGAGTTGCATGAAGAGACGCTGCGCGAACGTATTCTGACTCACGCCATCGAAGTTTA TAAGCGTAAAGAAGAGATTGTTGGTGCTGAGATGATGCGCCACTTTGAAAAAGGCGTGATGCTGCAAACACTCGACTCCC TTTGGAAAGAGCATCTGGCAGCAATGGATTATCTGCGTCAGGGTATCCACCTGCGTGGTTACGCGCAAAAAGATCCGAAG CAGGAATACAAGCGTGAGTCTTTCTCAATGTTTGCTGCAATGCTGGAATCACTGAAATATGAAGTGGTCAGTACGCTGAG TAAAGTTCAGGTACGTATGCCGGAAGAAGTTGAAGAGCTGGAGCAGCAGCGTCGTATGGAAGCCGAGCGTTTAGCACAAA TGCAGCAGCTGAGCCATCAGGATGACGACACTGCTGCAGCTGCGGCACTTGCTGCCCAAACGGGGGATCGTAAAGTGGGT CGTAATGATCCTTGCCCGTGTGGTTCTGGTAAAAAATACAAGCAGTGCCATGGCCGCCTGCAGTAA
Upstream 100 bases:
>100_bases GCGCAGGGTATCCGCGCCGGCCCTCAACGCCTTAGCTAAAAATATAAAACCATTAATTCCTTGTATTGACTCCGCTGAGC GGGGCGTTTGAGATTTTATT
Downstream 100 bases:
>100_bases TTAAATATTCACACATAAGGTAAAAGGCGCAGGATTCTGCGCCTTTTTTACAGGTTTAAAGCATGAAAAAACTGCAAATT GCGGTAGGGATAATCCGTAA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MLIKLLTKVFGSRNDRTLRRMRKAVNVINAMEPEMEKLSDDELKAKTAEFRARLEKGETVESLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMTVGINLPG MPAPAKRAAYAADITYGTNNEFGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN KIIPHLIRQEKEDSDTFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FRSIYRLDTVVVPTNRPMIRKDMPDLVYMSEAEKIQAIIEDIKECTARNQPVLVGTISIEKSELVSNELTKAGIKHNVLN AKFHANEAAIVAQAGYPGAVTIATNMAGRGTDIVLGGSWQAEVAALENPTPEQIEEIKAAWQVRHDQVLAAGGLHIIGTE RHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYAQRNELLDVSDVSETINSIREDVFKVTIDAYIPPQSLEEMWDIPGLQERLKNDFDLDMPI AEWLDKEPELHEETLRERILTHAIEVYKRKEEIVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFSMFAAMLESLKYEVVSTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQLSHQDDDTAAAAALAAQTGDRKVG RNDPCPCGSGKKYKQCHGRLQ
Sequences:
>Translated_901_residues MLIKLLTKVFGSRNDRTLRRMRKAVNVINAMEPEMEKLSDDELKAKTAEFRARLEKGETVESLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMTVGINLPG MPAPAKRAAYAADITYGTNNEFGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN KIIPHLIRQEKEDSDTFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FRSIYRLDTVVVPTNRPMIRKDMPDLVYMSEAEKIQAIIEDIKECTARNQPVLVGTISIEKSELVSNELTKAGIKHNVLN AKFHANEAAIVAQAGYPGAVTIATNMAGRGTDIVLGGSWQAEVAALENPTPEQIEEIKAAWQVRHDQVLAAGGLHIIGTE RHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYAQRNELLDVSDVSETINSIREDVFKVTIDAYIPPQSLEEMWDIPGLQERLKNDFDLDMPI AEWLDKEPELHEETLRERILTHAIEVYKRKEEIVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFSMFAAMLESLKYEVVSTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQLSHQDDDTAAAAALAAQTGDRKVG RNDPCPCGSGKKYKQCHGRLQ >Mature_901_residues MLIKLLTKVFGSRNDRTLRRMRKAVNVINAMEPEMEKLSDDELKAKTAEFRARLEKGETVESLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMTVGINLPG MPAPAKRAAYAADITYGTNNEFGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN KIIPHLIRQEKEDSDTFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FRSIYRLDTVVVPTNRPMIRKDMPDLVYMSEAEKIQAIIEDIKECTARNQPVLVGTISIEKSELVSNELTKAGIKHNVLN AKFHANEAAIVAQAGYPGAVTIATNMAGRGTDIVLGGSWQAEVAALENPTPEQIEEIKAAWQVRHDQVLAAGGLHIIGTE RHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYAQRNELLDVSDVSETINSIREDVFKVTIDAYIPPQSLEEMWDIPGLQERLKNDFDLDMPI AEWLDKEPELHEETLRERILTHAIEVYKRKEEIVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFSMFAAMLESLKYEVVSTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQLSHQDDDTAAAAALAAQTGDRKVG RNDPCPCGSGKKYKQCHGRLQ
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=901, Percent_Identity=95.6714761376249, Blast_Score=1784, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 101972; Mature: 101972
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKLLTKVFGSRNDRTLRRMRKAVNVINAMEPEMEKLSDDELKAKTAEFRARLEKGETV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHH ESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHH LSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMTVGINLPGMPAPAKRAAYAADITYGTNN HCCCCEEEEEECHHHHHCCCCCCCCHHHHHCHHEECCCCCCCCCHHHHHEEEEEEECCCC EFGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH KIIPHLIRQEKEDSDTFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHCC PANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK CHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFRSIYRLDTVVVPTNRPMIR CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCHH KDMPDLVYMSEAEKIQAIIEDIKECTARNQPVLVGTISIEKSELVSNELTKAGIKHNVLN HCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC AKFHANEAAIVAQAGYPGAVTIATNMAGRGTDIVLGGSWQAEVAALENPTPEQIEEIKAA CEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHH WQVRHDQVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFAS HHHHHHHEEEECCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH AQRNELLDVSDVSETINSIREDVFKVTIDAYIPPQSLEEMWDIPGLQERLKNDFDLDMPI HHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCCCCH AEWLDKEPELHEETLRERILTHAIEVYKRKEEIVGAEMMRHFEKGVMLQTLDSLWKEHLA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVVSTLSKVQVRMPEEVEEL HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQQRRMEAERLAQMQQLSHQDDDTAAAAALAAQTGDRKVGRNDPCPCGSGKKYKQCHGRL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC Q C >Mature Secondary Structure MLIKLLTKVFGSRNDRTLRRMRKAVNVINAMEPEMEKLSDDELKAKTAEFRARLEKGETV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHH ESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHH LSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMTVGINLPGMPAPAKRAAYAADITYGTNN HCCCCEEEEEECHHHHHCCCCCCCCHHHHHCHHEECCCCCCCCCHHHHHEEEEEEECCCC EFGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH KIIPHLIRQEKEDSDTFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHCC PANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK CHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFRSIYRLDTVVVPTNRPMIR CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCHH KDMPDLVYMSEAEKIQAIIEDIKECTARNQPVLVGTISIEKSELVSNELTKAGIKHNVLN HCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCC AKFHANEAAIVAQAGYPGAVTIATNMAGRGTDIVLGGSWQAEVAALENPTPEQIEEIKAA CEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHH WQVRHDQVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFAS HHHHHHHEEEECCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH AQRNELLDVSDVSETINSIREDVFKVTIDAYIPPQSLEEMWDIPGLQERLKNDFDLDMPI HHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCCCCH AEWLDKEPELHEETLRERILTHAIEVYKRKEEIVGAEMMRHFEKGVMLQTLDSLWKEHLA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVVSTLSKVQVRMPEEVEEL HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQQRRMEAERLAQMQQLSHQDDDTAAAAALAAQTGDRKVGRNDPCPCGSGKKYKQCHGRL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA