Click here to switch to the map view.

The map label for this gene is ydiM [H]

Identifier: 218547526

GI number: 218547526

Start: 96448

End: 97740

Strand: Reverse

Name: ydiM [H]

Synonym: EFER_0090

Alternate gene names: 218547526

Gene position: 97740-96448 (Counterclockwise)

Preceding gene: 218547527

Following gene: 218547525

Centisome position: 2.13

GC content: 48.72

Gene sequence:

>1293_bases
GTGCTGCAGCTTTTGAAATCTGGACGGGTAAAGAAATGCCCGTTGATTATATTAAAAGCATTCTGTTCTAAGGTCGGCGT
AATGAAAAATAAATACGTCCCAACTGCGGCGGGGCTTTATCTCAACTATATGCTTCACGGCATGGGGGTGCTGTTAATCA
CCCTCAACATGGCGCATTTGCAGCAACAATGGAGCACCGATGCCGCAGGTGTTTCTATTGTGATCTCCTCGCTGGGGATT
GGTAAGCTGGCAACACTATTAACCGGCTTCCTCTCTGATCGCTTTGGTCGTAAGCCGTTTATTTATCTCGGCATTCTCAG
TTATCTGCTGTTTTTAGTCGGGATTTTGCTGACCAAAAATATCTATGCCGCCTATGTCTTCGGTATTCTGGCGGGCCTGG
CGAACAGTTTCCTCGATTCCGGTACTTATCCGGCGTTAATGGAATCTTTCCCTAATTCTGCCAGTCGTGCGAATGTGCTG
ATCAAAGCATTTGTTTCTGCCGGGCAGTTCCTGTTGCCGTTTATTATCAGCTTCCTGATTTGGGCAAACTTGTGGTTTGG
CTGGTCATTCCTCATCGCAGCCGGGCTATTTGTGATTAGCGGCATCTATCTGGTGAAAATGCCCTTCCCGGATCATCGGG
CAAAAAAAGAAACTGTCGCAAAAACCGCAACAGTTACTGCACCTCAGACAAACGCCAATACCATGGATATGCTGATCTTT
ACGTTATATGGCTATATCGGCATGGCGACTTTTTATCTGGTCAGCCAGTGGTTAGCGCAGTATGGCCAGTTTGTTGCCGG
GATCCCATACGCTTCTGCCATTAAATTGCTGAGCATTTATACCGTAGGATCACTGACCTGCGTGTTCGTCACTGCGGCGT
TTGTCAAAGATGTGATGAGTTCAGCTATCGCAATGATCATCTACACTACTTTGTCGATGGTGGCGTTGTTGATCGTCTGC
CTGTTCCCGACGCCGATGGTTGTCACCGGATTCGCCTTTGTCATTGGTTTTGCGGCAGCCGGTGGTGTCCTGCAACTTGG
TGCCACGATCATGGCGATGAGCTTACCAAACGGTAAAGGCAAAGCGACGGGGATCTTTTACACTGCGGGTAGTCTTGCCA
GTTTCACGATCCCATTGATCACGGCGAAACTGTCAAAAATTAGCATTGCCAGCATCATGTGGTTCGATCTCTTAATCGCC
GTCATCGGCTTTGTGATAGCCCTTTATATCGGTTATCGTCAATTTCAGGCACGTGCCGCGCAAAAAACAGCCCGCGTTCC
GGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
TCTGATGTGGTGTACAACCCACGCAAAACCCATCTGTTGGAAGTCGCAGAGAACAGCGGTTGTCGCACTATTAACGGCCT
GGGAATGATGCTCTGGCAAG

Downstream 100 bases:

>100_bases
AGATTTACTGACAAAAAATGGATAACACTATGACGAATGCAGTAACGGTTAAAAACATCACTTTTCGGGAAGGCGAAACG
CTGATTTGCGTGCCGCTGCT

Product: MFS superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLQLLKSGRVKKCPLIILKAFCSKVGVMKNKYVPTAAGLYLNYMLHGMGVLLITLNMAHLQQQWSTDAAGVSIVISSLGI
GKLATLLTGFLSDRFGRKPFIYLGILSYLLFLVGILLTKNIYAAYVFGILAGLANSFLDSGTYPALMESFPNSASRANVL
IKAFVSAGQFLLPFIISFLIWANLWFGWSFLIAAGLFVISGIYLVKMPFPDHRAKKETVAKTATVTAPQTNANTMDMLIF
TLYGYIGMATFYLVSQWLAQYGQFVAGIPYASAIKLLSIYTVGSLTCVFVTAAFVKDVMSSAIAMIIYTTLSMVALLIVC
LFPTPMVVTGFAFVIGFAAAGGVLQLGATIMAMSLPNGKGKATGIFYTAGSLASFTIPLITAKLSKISIASIMWFDLLIA
VIGFVIALYIGYRQFQARAAQKTARVPAAA

Sequences:

>Translated_430_residues
MLQLLKSGRVKKCPLIILKAFCSKVGVMKNKYVPTAAGLYLNYMLHGMGVLLITLNMAHLQQQWSTDAAGVSIVISSLGI
GKLATLLTGFLSDRFGRKPFIYLGILSYLLFLVGILLTKNIYAAYVFGILAGLANSFLDSGTYPALMESFPNSASRANVL
IKAFVSAGQFLLPFIISFLIWANLWFGWSFLIAAGLFVISGIYLVKMPFPDHRAKKETVAKTATVTAPQTNANTMDMLIF
TLYGYIGMATFYLVSQWLAQYGQFVAGIPYASAIKLLSIYTVGSLTCVFVTAAFVKDVMSSAIAMIIYTTLSMVALLIVC
LFPTPMVVTGFAFVIGFAAAGGVLQLGATIMAMSLPNGKGKATGIFYTAGSLASFTIPLITAKLSKISIASIMWFDLLIA
VIGFVIALYIGYRQFQARAAQKTARVPAAA
>Mature_430_residues
MLQLLKSGRVKKCPLIILKAFCSKVGVMKNKYVPTAAGLYLNYMLHGMGVLLITLNMAHLQQQWSTDAAGVSIVISSLGI
GKLATLLTGFLSDRFGRKPFIYLGILSYLLFLVGILLTKNIYAAYVFGILAGLANSFLDSGTYPALMESFPNSASRANVL
IKAFVSAGQFLLPFIISFLIWANLWFGWSFLIAAGLFVISGIYLVKMPFPDHRAKKETVAKTATVTAPQTNANTMDMLIF
TLYGYIGMATFYLVSQWLAQYGQFVAGIPYASAIKLLSIYTVGSLTCVFVTAAFVKDVMSSAIAMIIYTTLSMVALLIVC
LFPTPMVVTGFAFVIGFAAAGGVLQLGATIMAMSLPNGKGKATGIFYTAGSLASFTIPLITAKLSKISIASIMWFDLLIA
VIGFVIALYIGYRQFQARAAQKTARVPAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=388, Percent_Identity=62.3711340206186, Blast_Score=483, Evalue=1e-138,
Organism=Escherichia coli, GI226510946, Length=382, Percent_Identity=37.696335078534, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46318; Mature: 46318

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLLKSGRVKKCPLIILKAFCSKVGVMKNKYVPTAAGLYLNYMLHGMGVLLITLNMAHL
CCCCHHCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQWSTDAAGVSIVISSLGIGKLATLLTGFLSDRFGRKPFIYLGILSYLLFLVGILLTKN
HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IYAAYVFGILAGLANSFLDSGTYPALMESFPNSASRANVLIKAFVSAGQFLLPFIISFLI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
WANLWFGWSFLIAAGLFVISGIYLVKMPFPDHRAKKETVAKTATVTAPQTNANTMDMLIF
HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHEEECCCCCCCHHHHHHH
TLYGYIGMATFYLVSQWLAQYGQFVAGIPYASAIKLLSIYTVGSLTCVFVTAAFVKDVMS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIAMIIYTTLSMVALLIVCLFPTPMVVTGFAFVIGFAAAGGVLQLGATIMAMSLPNGKG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCC
KATGIFYTAGSLASFTIPLITAKLSKISIASIMWFDLLIAVIGFVIALYIGYRQFQARAA
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKTARVPAAA
HHHCCCCCCC
>Mature Secondary Structure
MLQLLKSGRVKKCPLIILKAFCSKVGVMKNKYVPTAAGLYLNYMLHGMGVLLITLNMAHL
CCCCHHCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQWSTDAAGVSIVISSLGIGKLATLLTGFLSDRFGRKPFIYLGILSYLLFLVGILLTKN
HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IYAAYVFGILAGLANSFLDSGTYPALMESFPNSASRANVLIKAFVSAGQFLLPFIISFLI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
WANLWFGWSFLIAAGLFVISGIYLVKMPFPDHRAKKETVAKTATVTAPQTNANTMDMLIF
HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHEEECCCCCCCHHHHHHH
TLYGYIGMATFYLVSQWLAQYGQFVAGIPYASAIKLLSIYTVGSLTCVFVTAAFVKDVMS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIAMIIYTTLSMVALLIVCLFPTPMVVTGFAFVIGFAAAGGVLQLGATIMAMSLPNGKG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCC
KATGIFYTAGSLASFTIPLITAKLSKISIASIMWFDLLIAVIGFVIALYIGYRQFQARAA
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKTARVPAAA
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]