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The map label for this gene is yabI [H]

Identifier: 218547518

GI number: 218547518

Start: 85714

End: 86478

Strand: Direct

Name: yabI [H]

Synonym: EFER_0079

Alternate gene names: 218547518

Gene position: 85714-86478 (Clockwise)

Preceding gene: 218547517

Following gene: 218547523

Centisome position: 1.87

GC content: 53.99

Gene sequence:

>765_bases
ATGCAAGCATTGCTGGAACACTTTATTACTCAATCGACCGCGTATTCTCTGATGGCTGTTGTGCTGGTGGCTTTTCTGGA
GTCGCTGGCGCTGGTCGGTCTGATTCTGCCAGGTACGGTACTGATGGCAGGACTGGGGGCACTGATTGGCAGCGGCGAGT
TGAGTTTTTGGTATGCCTGGCTGGCCGGTATTGTCGGTTGCCTGCTGGGGGACTGGATCTCCTTCTGGCTGGGCTGGCGT
TTTAAAAAGCCGTTGCATCGCTGGTCTTTTATGAAGAAGAACAAAGCGTTGCTCGATAAGACCGAACATGCGCTACATCA
GCACAGCATGTTTACCATTCTGGTCGGACGTTTTGTCGGGCCGACGCGTCCGCTGGTACCGATGGTGGCAGGGATGCTGG
ATCTGCCAGTGCGTAAGTTTCTTTTACCGAATATTGTAGGTTGCCTGTTGTGGCCGCCGTTTTACTTCCTGCCGGGGATT
CTGGCGGGCGCGGCGATCGATATTCCTGCCGGAATGCAGAGTGGCGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTT
TTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTCATGGCGCAGTGGTAAAGCGACTGACCGTTTAAGTCATTATTTGTCGC
GCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTAGCGCTGGTGGTGTTAATTCGCCACCCGTTG
ATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGAGTTTAG

Upstream 100 bases:

>100_bases
AAATGATTCGCGTTGCAGGAGTATATTCATACAAAGAATAGATTGACCTGAATACCACCACTTCGCACAATCCACGACGA
ATTCATCAACCGGGCGCATT

Downstream 100 bases:

>100_bases
GCCTGCATGGCAGTGTAACTGTTTGATATTTAAATTTTTATTGTCGGATGCGGCATTCACACCGCATCCGATATGACAGA
TTAACCTTTAATCCCCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQALLEHFITQSTAYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWYAWLAGIVGCLLGDWISFWLGWR
FKKPLHRWSFMKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVRKFLLPNIVGCLLWPPFYFLPGI
LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRSWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL
MPVYIDILRKVVGV

Sequences:

>Translated_254_residues
MQALLEHFITQSTAYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWYAWLAGIVGCLLGDWISFWLGWR
FKKPLHRWSFMKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVRKFLLPNIVGCLLWPPFYFLPGI
LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRSWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL
MPVYIDILRKVVGV
>Mature_254_residues
MQALLEHFITQSTAYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWYAWLAGIVGCLLGDWISFWLGWR
FKKPLHRWSFMKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVRKFLLPNIVGCLLWPPFYFLPGI
LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRSWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL
MPVYIDILRKVVGV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=254, Percent_Identity=96.0629921259843, Blast_Score=486, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 28286; Mature: 28286

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCC
>Mature Secondary Structure
MQALLEHFITQSTAYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWYAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNKALLDKTEHALHQHSMFTILVGRFVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTRPLVPMVAGMLDLPVRKFLLPNIVGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCHHHH
LLATAVFLWVGGWLCWRSWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
MPVYIDILRKVVGV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]