Click here to switch to the map view.

The map label for this gene is arcB [C]

Identifier: 218533232

GI number: 218533232

Start: 5746385

End: 5748283

Strand: Reverse

Name: arcB [C]

Synonym: Mchl_5360

Alternate gene names: 218533232

Gene position: 5748283-5746385 (Counterclockwise)

Preceding gene: 218533234

Following gene: 218533231

Centisome position: 99.49

GC content: 68.51

Gene sequence:

>1899_bases
ATGGTTTCCACCGGCTACAATCCGGCTCTCGTGGCGCTGTCCCTCGCCATCGCCGTGCTCGCCTCCTACACGGCGCTCGA
TCTCGGCGGCCGCGTGCGGGCCGCCGCATCCGGACTGGGCTGGGCTTGGCTTCTGGGTGCCGCCCTGGCGATGGGGGGCG
GCATCTGGTCGATGCACTTCGTCGGGATGCTGGCCTTCGAGATGGGCCTGCCCGCCGCCTACGACCTCGGCCACACCTTC
CTGTCCCTGCTCATCGCCATTGGGACGACCGGCGCGGCCCTGGCCTGGGTCGGCCGTCGGCGGGCCGGCCGCTGGGATGT
CCTCGTCGCGGGCCCCGTGATGGGAATCGGCGTGGCAGCGATGCACTATACCGGGATGGCCGCGATGCGGATGCCCGGCC
ATCTCGCTTACAGCGTGCCGGTCGTCACGCTCTCGGTCGGGATCGCCATCACCGCGGCGACCATCGCCCTGTGGCTGACC
TTTCGGCCGACGAGCGTCTGGCAGCGCTTCGCCGCCGCCCTGATCATGGGCGTTGCGGTAGCCGGGATGCACTATACCGG
CATGGCGGCCGCGACGATCACCGCCGAGGAAGCCGGCGCCCATTCCGCCCATCTCGCCGCGACGAGCGTGGATCAGCAGA
ATCTCGCCCTCTACGTCGCCGGGGTGACCTTCGTGATCCTGTTCCTCGCGATGCTCGCCTCCGCTTTCGATCAGCAGCGG
ATCCAGGGTGAGTTGCGGGCGAGCGAGGAGCGTTTCCGTGCCGCCGTACAGGCCGTGCGCGGCGTGTTGTGGACCAACGA
CCCGCAGGGGCGGATGACGGGCGAACAACCCGGCTGGACCGCCCTCACGGGACAAACCCGCACCGAGTACGAGGGCTTTG
GCTGGGCCGACGCGGTGCATCCGGAGGACCGGCAAGCGAGCGTCGAGGCTTGGAATGCGACCGTTGCCGCCCGCAGCACC
TTCCTGCACGAGCATCGGGTGCGCGCCCGGGACGGCCTGTGGCGACATTTCTCGATCCGCGCGATCCCCGTGCTCGACCC
GCACGGCGCCATCCGCGAATGGGTCGGCGTCCATACCGACATCACCGAGCAGCGCGAGGCCGAAGCCGAATTGCGGGAGT
CGAACGAGGAGATCCAGCGCTACGCCTACATCGTGAGCCACGACCTGCGCGCGCCGCTCGTCAACGTCATGGGTTTCACG
AGCGAGTTGGAGGCGGTGCGCCAGGAATTGCGTACGGTGCTGCGTGACCATCCGCAGGGCGCGCGGATCGATGAGGACAT
CACCGAGGCGCTGAGCTTCATCCAGGCGGCGATCGTCAAGATGGAGCGCTTGATCGCCGCCATCCTGAAGCTTTCGCGGG
AGGGGCGGCGCCGGTTCAGCCCGGAGCCGCTCGCGATGTCATCCGTGATCCGCGGCATCGCCGACGCGCAGCGTCATCAG
GCCGGGCGCAAGGGTGTGACGGTGACGGTAGCCGACGATCTTCCCTCGATCGTGGCCGACCGGCTCGCCGTGGAACAGGT
TTTCGGCAACCTGATCGACAACGCCCTCAAATATCTCGATCCGGCCCGCCCCGGAACGATCGTGGTCACGGCCCGACCTG
CACCCGGCAACCGAGTCCGTTTTGACGTCTCCGACACCGGGCGAGGTATCGCGCCGCAGGATCATGGCCGCATCTTCGAG
CTGTTCCGGCGGTCCGGCACGCAGGATCAGCCGGGGGAGGGGATCGGGCTCGCCAGCGTGAAAGCATTGGTGCGCGCGCT
CGGCGGCCGGATCGAGGTTTCGTCACAACCCGGTGTCGGCACAACCTTTATCGTGACGCTGCCGCGCGAGCCGGTTACAG
GCCGAGGCGGGGCCGCGACACTCGATCCTCCCGATACGATGACCCTGGCCGCGGAGTAG

Upstream 100 bases:

>100_bases
TCGTGCCGCGCCCGGCTCGCGTCGTCACGGTTCGAGGAGCCGACCTGATGGCGCTCGTGGCGCAAGAACGTATCGACAGC
CTACGAGATTCGGCACGACG

Downstream 100 bases:

>100_bases
CGATGCAGCCCCCTTTTCATACCGTCAGCATCGTGATGATCGAGGATGACGAGGGTCACGCCCGACTGATCGAGCGCAAC
ATCCGGCGCGCGGGGGTCAA

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MVSTGYNPALVALSLAIAVLASYTALDLGGRVRAAASGLGWAWLLGAALAMGGGIWSMHFVGMLAFEMGLPAAYDLGHTF
LSLLIAIGTTGAALAWVGRRRAGRWDVLVAGPVMGIGVAAMHYTGMAAMRMPGHLAYSVPVVTLSVGIAITAATIALWLT
FRPTSVWQRFAAALIMGVAVAGMHYTGMAAATITAEEAGAHSAHLAATSVDQQNLALYVAGVTFVILFLAMLASAFDQQR
IQGELRASEERFRAAVQAVRGVLWTNDPQGRMTGEQPGWTALTGQTRTEYEGFGWADAVHPEDRQASVEAWNATVAARST
FLHEHRVRARDGLWRHFSIRAIPVLDPHGAIREWVGVHTDITEQREAEAELRESNEEIQRYAYIVSHDLRAPLVNVMGFT
SELEAVRQELRTVLRDHPQGARIDEDITEALSFIQAAIVKMERLIAAILKLSREGRRRFSPEPLAMSSVIRGIADAQRHQ
AGRKGVTVTVADDLPSIVADRLAVEQVFGNLIDNALKYLDPARPGTIVVTARPAPGNRVRFDVSDTGRGIAPQDHGRIFE
LFRRSGTQDQPGEGIGLASVKALVRALGGRIEVSSQPGVGTTFIVTLPREPVTGRGGAATLDPPDTMTLAAE

Sequences:

>Translated_632_residues
MVSTGYNPALVALSLAIAVLASYTALDLGGRVRAAASGLGWAWLLGAALAMGGGIWSMHFVGMLAFEMGLPAAYDLGHTF
LSLLIAIGTTGAALAWVGRRRAGRWDVLVAGPVMGIGVAAMHYTGMAAMRMPGHLAYSVPVVTLSVGIAITAATIALWLT
FRPTSVWQRFAAALIMGVAVAGMHYTGMAAATITAEEAGAHSAHLAATSVDQQNLALYVAGVTFVILFLAMLASAFDQQR
IQGELRASEERFRAAVQAVRGVLWTNDPQGRMTGEQPGWTALTGQTRTEYEGFGWADAVHPEDRQASVEAWNATVAARST
FLHEHRVRARDGLWRHFSIRAIPVLDPHGAIREWVGVHTDITEQREAEAELRESNEEIQRYAYIVSHDLRAPLVNVMGFT
SELEAVRQELRTVLRDHPQGARIDEDITEALSFIQAAIVKMERLIAAILKLSREGRRRFSPEPLAMSSVIRGIADAQRHQ
AGRKGVTVTVADDLPSIVADRLAVEQVFGNLIDNALKYLDPARPGTIVVTARPAPGNRVRFDVSDTGRGIAPQDHGRIFE
LFRRSGTQDQPGEGIGLASVKALVRALGGRIEVSSQPGVGTTFIVTLPREPVTGRGGAATLDPPDTMTLAAE
>Mature_632_residues
MVSTGYNPALVALSLAIAVLASYTALDLGGRVRAAASGLGWAWLLGAALAMGGGIWSMHFVGMLAFEMGLPAAYDLGHTF
LSLLIAIGTTGAALAWVGRRRAGRWDVLVAGPVMGIGVAAMHYTGMAAMRMPGHLAYSVPVVTLSVGIAITAATIALWLT
FRPTSVWQRFAAALIMGVAVAGMHYTGMAAATITAEEAGAHSAHLAATSVDQQNLALYVAGVTFVILFLAMLASAFDQQR
IQGELRASEERFRAAVQAVRGVLWTNDPQGRMTGEQPGWTALTGQTRTEYEGFGWADAVHPEDRQASVEAWNATVAARST
FLHEHRVRARDGLWRHFSIRAIPVLDPHGAIREWVGVHTDITEQREAEAELRESNEEIQRYAYIVSHDLRAPLVNVMGFT
SELEAVRQELRTVLRDHPQGARIDEDITEALSFIQAAIVKMERLIAAILKLSREGRRRFSPEPLAMSSVIRGIADAQRHQ
AGRKGVTVTVADDLPSIVADRLAVEQVFGNLIDNALKYLDPARPGTIVVTARPAPGNRVRFDVSDTGRGIAPQDHGRIFE
LFRRSGTQDQPGEGIGLASVKALVRALGGRIEVSSQPGVGTTFIVTLPREPVTGRGGAATLDPPDTMTLAAE

Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Sensor-Regulator Protein For Anaerobic Repression Of The Arc Modulon. Activates Arca Via A Four-Step Phosphorelay. Arcb Can Also Dephosphorylate Arca By A Reverse Phosphorelay Involving His- 717 And

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=381, Percent_Identity=24.6719160104987, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1789149, Length=261, Percent_Identity=28.735632183908, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI145693157, Length=269, Percent_Identity=28.2527881040892, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788713, Length=270, Percent_Identity=25.1851851851852, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI87081816, Length=265, Percent_Identity=28.6792452830189, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788393, Length=248, Percent_Identity=27.0161290322581, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1790861, Length=231, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786912, Length=250, Percent_Identity=28.8, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786783, Length=250, Percent_Identity=26.4, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1790436, Length=120, Percent_Identity=40, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790567, Length=102, Percent_Identity=43.1372549019608, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 67870; Mature: 67870

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50924 MHYT ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTGYNPALVALSLAIAVLASYTALDLGGRVRAAASGLGWAWLLGAALAMGGGIWSMHF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
VGMLAFEMGLPAAYDLGHTFLSLLIAIGTTGAALAWVGRRRAGRWDVLVAGPVMGIGVAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHH
MHYTGMAAMRMPGHLAYSVPVVTLSVGIAITAATIALWLTFRPTSVWQRFAAALIMGVAV
HHHHCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
AGMHYTGMAAATITAEEAGAHSAHLAATSVDQQNLALYVAGVTFVILFLAMLASAFDQQR
HCCHHCCCEEEEEEHHHCCCCCHHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IQGELRASEERFRAAVQAVRGVLWTNDPQGRMTGEQPGWTALTGQTRTEYEGFGWADAVH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PEDRQASVEAWNATVAARSTFLHEHRVRARDGLWRHFSIRAIPVLDPHGAIREWVGVHTD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCHHHHHHHCCCCC
ITEQREAEAELRESNEEIQRYAYIVSHDLRAPLVNVMGFTSELEAVRQELRTVLRDHPQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
ARIDEDITEALSFIQAAIVKMERLIAAILKLSREGRRRFSPEPLAMSSVIRGIADAQRHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AGRKGVTVTVADDLPSIVADRLAVEQVFGNLIDNALKYLDPARPGTIVVTARPAPGNRVR
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE
FDVSDTGRGIAPQDHGRIFELFRRSGTQDQPGEGIGLASVKALVRALGGRIEVSSQPGVG
EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCC
TTFIVTLPREPVTGRGGAATLDPPDTMTLAAE
EEEEEEECCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MVSTGYNPALVALSLAIAVLASYTALDLGGRVRAAASGLGWAWLLGAALAMGGGIWSMHF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
VGMLAFEMGLPAAYDLGHTFLSLLIAIGTTGAALAWVGRRRAGRWDVLVAGPVMGIGVAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHH
MHYTGMAAMRMPGHLAYSVPVVTLSVGIAITAATIALWLTFRPTSVWQRFAAALIMGVAV
HHHHCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
AGMHYTGMAAATITAEEAGAHSAHLAATSVDQQNLALYVAGVTFVILFLAMLASAFDQQR
HCCHHCCCEEEEEEHHHCCCCCHHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IQGELRASEERFRAAVQAVRGVLWTNDPQGRMTGEQPGWTALTGQTRTEYEGFGWADAVH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PEDRQASVEAWNATVAARSTFLHEHRVRARDGLWRHFSIRAIPVLDPHGAIREWVGVHTD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCHHHHHHHCCCCC
ITEQREAEAELRESNEEIQRYAYIVSHDLRAPLVNVMGFTSELEAVRQELRTVLRDHPQG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
ARIDEDITEALSFIQAAIVKMERLIAAILKLSREGRRRFSPEPLAMSSVIRGIADAQRHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AGRKGVTVTVADDLPSIVADRLAVEQVFGNLIDNALKYLDPARPGTIVVTARPAPGNRVR
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE
FDVSDTGRGIAPQDHGRIFELFRRSGTQDQPGEGIGLASVKALVRALGGRIEVSSQPGVG
EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCC
TTFIVTLPREPVTGRGGAATLDPPDTMTLAAE
EEEEEEECCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]