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The map label for this gene is ygaU [C]

Identifier: 218533083

GI number: 218533083

Start: 5574618

End: 5576153

Strand: Reverse

Name: ygaU [C]

Synonym: Mchl_5209

Alternate gene names: 218533083

Gene position: 5576153-5574618 (Counterclockwise)

Preceding gene: 218533086

Following gene: 218533082

Centisome position: 96.51

GC content: 72.07

Gene sequence:

>1536_bases
ATGACGGCTGAGGTACGGCGAAGCATCGTCCTCGCGATTGCGGGCCTGCTCGGCGGCTTCGCCATGGTGGTCGCGTTGTT
CGGGACCGGAGAGCTTCTCAAGCGCAACGCGGCGGTCAATCCTTCTGCCGAAACACCGGCCACGCCGGACAAGCCTTCGG
CCGGGACGCAGACCGGCGACCGCGCGGGTAAGGCGCCCTCGACGGACTCCCCTCATGCCGCCCTCGGAGCCCTCTCGCAA
GAGGGGATCGGGCCGGGAGAACCGAGCGCGACCGATGCGAAGCCGCGTGCGGATGACGGCACGCCGACCTTCGACATCGT
GCGTGTCGAGCCCGACGGAGCGAGCGTGATCGCCGGGCGGGCGGCACCGAACAGCCGCATTGAGCTGCTGCGCGACGGAA
AACCCTTCGCCAGCGCTCAGGCCGACGCTTCCGGGCAGTTCGCCCTGACGCCGCCGGACCTGCCGCCGGGCTCGAGCGAA
ATCGCCCTGCGTGCCACCGATGCCGATGGAAAGCCGCTGCCGGGGCGCGAGAGCGTGACCGTCGTCGTAGCCGAGGCGCG
CAATACCAAGCCGCTGATCGCCCTGACGGCCCCGGACGCGCCGACGCGCGTTCTATCCCAACCCGGCGCGCCGGACGCCT
CCGGCAAACCGCCGGCCACGGTTGCCGCCGAAACGCCCGGACGGGCCGGGCCCGAGCCAAAGGTCGCCGAGGGATCGCGG
GGAGCCGGCAAGGCGGTATCGGGGGCGGGCGCCCTTCGCATCGTCAGCGTGGACGCGCAGGAGGGTGGGCGCCTGCACGT
CACCGGCCAGACGACGGCGTGGAGCAGCCTGCGCCTCTACCTCAACGACACCATGGTCGCCTCGGGACAATCCGGAGCCG
ACGGCCGGGTGGCGTTCACGATCGGGCGCGGGGTGAAGCCGGGCGCCTACCGCATCCGCGTCGATTCCGTCGATTCGGGG
GGCAGCAAGGTGAAGGCCCGCGCCGAAGTCGCCTTCGCCTATCCCGACAGCGTGCCGCCGACGCGCTACGCCGACAACAG
CCCGGCCGAGACAACAGCACCCGCGGCGATGGGCAAGCCATCCGCGACGGCACCGGCTGCGGCGAAGCTCAAATCCGGCG
AGGTGGGGGCCGTACCGAGCCCCGCGGCGCCCCCAGCCAGGGCAAGCGGCGCAGCAGGGACCGAGCCGGAGCGTCCGGCT
GCGTCCGGCACCGGGTCTTTGGCCGCAGCGGCACCGGCGCCGGGCGTGGATGGCAGAGCCGCCGCGCTCTCGCCGCGCCG
TCCGGACGGCGTCGAGGGGGGCGCCGTGTTCTTGCCGGAGGTCGCCACCGCCCGGATCACCCGCGGCGACAGCCTGTGGC
AGATCAGCCGGCGCACCTATGGCCGCGGCAACCGCTACACCGTGATCTACGACGCCAACCAAGAGCAGATCCGCGACCCG
AACCGGATCTATCCCGGCCAGATGTTCGTGCTGCCGAACAACGAATCCAAGCCGAGCGTGCCGTCCGCCAAAGGCGGCCC
GGACCGACGGACCTGA

Upstream 100 bases:

>100_bases
CATGTTCGTTAATATGTCACCGGATTTAGACGGGTTTTCGACACGCGGCGGCAGATCGTGCGCGCCCGCGGCGGCCCGTA
GCGTACGGGAGTAGACGGCC

Downstream 100 bases:

>100_bases
CGGAACGGGCGGAGGCCCGAGGCGCGAAGAGGATGTGCGATCCGGTGCGAGCGCCTATATGCGCCTCGCGACGGCCGCCT
GGCGCCGAAAGATCTCTTCG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTAEVRRSIVLAIAGLLGGFAMVVALFGTGELLKRNAAVNPSAETPATPDKPSAGTQTGDRAGKAPSTDSPHAALGALSQ
EGIGPGEPSATDAKPRADDGTPTFDIVRVEPDGASVIAGRAAPNSRIELLRDGKPFASAQADASGQFALTPPDLPPGSSE
IALRATDADGKPLPGRESVTVVVAEARNTKPLIALTAPDAPTRVLSQPGAPDASGKPPATVAAETPGRAGPEPKVAEGSR
GAGKAVSGAGALRIVSVDAQEGGRLHVTGQTTAWSSLRLYLNDTMVASGQSGADGRVAFTIGRGVKPGAYRIRVDSVDSG
GSKVKARAEVAFAYPDSVPPTRYADNSPAETTAPAAMGKPSATAPAAAKLKSGEVGAVPSPAAPPARASGAAGTEPERPA
ASGTGSLAAAAPAPGVDGRAAALSPRRPDGVEGGAVFLPEVATARITRGDSLWQISRRTYGRGNRYTVIYDANQEQIRDP
NRIYPGQMFVLPNNESKPSVPSAKGGPDRRT

Sequences:

>Translated_511_residues
MTAEVRRSIVLAIAGLLGGFAMVVALFGTGELLKRNAAVNPSAETPATPDKPSAGTQTGDRAGKAPSTDSPHAALGALSQ
EGIGPGEPSATDAKPRADDGTPTFDIVRVEPDGASVIAGRAAPNSRIELLRDGKPFASAQADASGQFALTPPDLPPGSSE
IALRATDADGKPLPGRESVTVVVAEARNTKPLIALTAPDAPTRVLSQPGAPDASGKPPATVAAETPGRAGPEPKVAEGSR
GAGKAVSGAGALRIVSVDAQEGGRLHVTGQTTAWSSLRLYLNDTMVASGQSGADGRVAFTIGRGVKPGAYRIRVDSVDSG
GSKVKARAEVAFAYPDSVPPTRYADNSPAETTAPAAMGKPSATAPAAAKLKSGEVGAVPSPAAPPARASGAAGTEPERPA
ASGTGSLAAAAPAPGVDGRAAALSPRRPDGVEGGAVFLPEVATARITRGDSLWQISRRTYGRGNRYTVIYDANQEQIRDP
NRIYPGQMFVLPNNESKPSVPSAKGGPDRRT
>Mature_510_residues
TAEVRRSIVLAIAGLLGGFAMVVALFGTGELLKRNAAVNPSAETPATPDKPSAGTQTGDRAGKAPSTDSPHAALGALSQE
GIGPGEPSATDAKPRADDGTPTFDIVRVEPDGASVIAGRAAPNSRIELLRDGKPFASAQADASGQFALTPPDLPPGSSEI
ALRATDADGKPLPGRESVTVVVAEARNTKPLIALTAPDAPTRVLSQPGAPDASGKPPATVAAETPGRAGPEPKVAEGSRG
AGKAVSGAGALRIVSVDAQEGGRLHVTGQTTAWSSLRLYLNDTMVASGQSGADGRVAFTIGRGVKPGAYRIRVDSVDSGG
SKVKARAEVAFAYPDSVPPTRYADNSPAETTAPAAMGKPSATAPAAAKLKSGEVGAVPSPAAPPARASGAAGTEPERPAA
SGTGSLAAAAPAPGVDGRAAALSPRRPDGVEGGAVFLPEVATARITRGDSLWQISRRTYGRGNRYTVIYDANQEQIRDPN
RIYPGQMFVLPNNESKPSVPSAKGGPDRRT

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51611; Mature: 51480

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEVRRSIVLAIAGLLGGFAMVVALFGTGELLKRNAAVNPSAETPATPDKPSAGTQTGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
RAGKAPSTDSPHAALGALSQEGIGPGEPSATDAKPRADDGTPTFDIVRVEPDGASVIAGR
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC
AAPNSRIELLRDGKPFASAQADASGQFALTPPDLPPGSSEIALRATDADGKPLPGRESVT
CCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEE
VVVAEARNTKPLIALTAPDAPTRVLSQPGAPDASGKPPATVAAETPGRAGPEPKVAEGSR
EEEEECCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
GAGKAVSGAGALRIVSVDAQEGGRLHVTGQTTAWSSLRLYLNDTMVASGQSGADGRVAFT
CCCCEECCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEECEEEECCCCCCCCEEEEE
IGRGVKPGAYRIRVDSVDSGGSKVKARAEVAFAYPDSVPPTRYADNSPAETTAPAAMGKP
ECCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCC
SATAPAAAKLKSGEVGAVPSPAAPPARASGAAGTEPERPAASGTGSLAAAAPAPGVDGRA
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCE
AALSPRRPDGVEGGAVFLPEVATARITRGDSLWQISRRTYGRGNRYTVIYDANQEQIRDP
EECCCCCCCCCCCCEEECCCCCEEEEECCCCEEEEHHHHCCCCCEEEEEECCCHHHCCCC
NRIYPGQMFVLPNNESKPSVPSAKGGPDRRT
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAEVRRSIVLAIAGLLGGFAMVVALFGTGELLKRNAAVNPSAETPATPDKPSAGTQTGD
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
RAGKAPSTDSPHAALGALSQEGIGPGEPSATDAKPRADDGTPTFDIVRVEPDGASVIAGR
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC
AAPNSRIELLRDGKPFASAQADASGQFALTPPDLPPGSSEIALRATDADGKPLPGRESVT
CCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEE
VVVAEARNTKPLIALTAPDAPTRVLSQPGAPDASGKPPATVAAETPGRAGPEPKVAEGSR
EEEEECCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
GAGKAVSGAGALRIVSVDAQEGGRLHVTGQTTAWSSLRLYLNDTMVASGQSGADGRVAFT
CCCCEECCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEECEEEECCCCCCCCEEEEE
IGRGVKPGAYRIRVDSVDSGGSKVKARAEVAFAYPDSVPPTRYADNSPAETTAPAAMGKP
ECCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCC
SATAPAAAKLKSGEVGAVPSPAAPPARASGAAGTEPERPAASGTGSLAAAAPAPGVDGRA
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCE
AALSPRRPDGVEGGAVFLPEVATARITRGDSLWQISRRTYGRGNRYTVIYDANQEQIRDP
EECCCCCCCCCCCCEEECCCCCEEEEECCCCEEEEHHHHCCCCCEEEEEECCCHHHCCCC
NRIYPGQMFVLPNNESKPSVPSAKGGPDRRT
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA