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The map label for this gene is omp85 [H]

Identifier: 218532669

GI number: 218532669

Start: 5068727

End: 5071261

Strand: Reverse

Name: omp85 [H]

Synonym: Mchl_4783

Alternate gene names: 218532669

Gene position: 5071261-5068727 (Counterclockwise)

Preceding gene: 218532671

Following gene: 218532668

Centisome position: 87.77

GC content: 63.75

Gene sequence:

>2535_bases
ATGATCGCGGGGCCTCCGGCTGCATCGAGTGTGTCAGTGATTCATTTTGGTTTCTGGCGAAGCTGCCTTGTTGGCATAGT
CGCGCTGCCTCACCTTGCCGGGGGTGCCGTTGCTGCTCAACTCCTCATCGAGGGCAATCGACGGGTCGATGCGGAGGTGA
TCCGCTCCATCGTCGCGAACGCTCCAGCGGATGCCCGCCGTGAACTCATGGCAAGCGGCTACTTCTCGGATGTCACGCTG
ACGCAAGCGAACGGTCGCACCCTGGTGCGCGTACAAGAGAAAGGCGTGGTCGGCCGCGTCTTCTTCGAGGGCAACAAGAA
AGTCGAGAAGGCCACCCTCGAAGCGACCATTGTCACCCGGGGCGCAGCCCCCCTCGATCCGGCTCAAGTGGCCGCCGACG
TGGAGCGCATCCGCGACGTCTACAAGCGCTCGGGCCGCGGCACCGCCAAGGTCAGCTACCGCCTCGTCGACCTGCCCAGC
GGACGTTCCGACGTCATCTACGCCATCGACGAGGGCGATAAGACCGGCATCCGTGAGATCCACTTCATCGGCAACCAAGC
CTATTCGGAATCGACCCTCAAGGGTCTGATGTCCTCCTCGGAGATGAACTTCCTCTCGTTCATCAAGACCTCCGACGTCT
ACGATCCCGACCGTATCTCCGCCGACCTCGACATCGTGCGCCGGTACTACCTGAAGAACGGCTATGCCGACTTCCGCGTC
GTCAACGCCGATGCCCGCTACGTCGAGACCGGCGACGATGCCGGCTGGGTCATCAACGTCACCGTCGAGGAAGGTGAGCA
ATACACCGTCGGCGCAGTGGCCGTGGACCCGCGCATCGCCGGCATCGACCGCGAGGCGCTCGACGGGCAGATCCGCGCCC
AGGTCGGCGACGTCTACAACGCCGAGGACGTCGAGAAGACGCTCGTTGGCGTCACCAACGAGGTCAACCGCCAGGGCTAC
CCCTTCGCCCAGGTGCGTCCCACCGGTCAGCGCGACCGTGCCACCCATCAGGTCGCCCTCGGCTTCGTGGTCGAGGACGG
TCCGCGCGTCTACGTCGAGCGCATCAACATCCGCGGTAACACCCGGACCCGCGACTACGTCATCCGCCGCGAGCTCGATC
TGACCGAGGGCGATGCCTACAACCGCGTGCTGGTCGATCGTGCCGAGCGCCGGCTGAACGGCCTGGGCTTCTTCAAGAAG
GTGCGCTTCTCCAACGAGCCGGGCTCGGCCCCGGACCGGGTGATCGTGAACATCGACGTTGAGGATCAACCCACGGGTTC
GTTCTCGGTGGCCGGCGGCTACTCCACCCAGGACGGCATCATCGGCGAAGTCTCCGTCTCCGAGTCGAACTTCCTCGGCC
GCGGCCAGTATGTCCGGTTGGCGGTCCAGGCAGGGCAATATGCCAGGGGCGTCGATGTCTCATTTACCGAGCCGTACTTC
CTCGGCTATCGCATGGCGGCTGGCATCGATGCCTTCTACAAGTACAGCAACCTCGCGCGCTATTCGCGCTACGAGACGAC
GGTTGTCGGCACGCAGCTCCGCCTCGGCCTTCCGGTGACGGACGAATTCGGCGTCACCTTCCGCTACTCGATCTACAACA
CCGATCTGAAGGTCCCGAACACGCTGAGCCAGCCCTACAACGACTGCTCCAGCCCGATCAGCGGCTACACGGCGGTCAAC
GCGGCGGGACAAGCGACCTATCCAGCCTGCACCTATGACGGCGAGGCCTCTATCGCCATCAAGTCGGCGCAGGGCTCGAC
CTTGACCTCACTCGTCGGCGCGACACTGGCTTACTCGACCCTCGACAACCTCCAGCGTCCGACCAACGGCTTCTACGCGG
AACTGAAACCTGAGATTGCCGGGCTTGGGGGCGACTCGAACTTCTACCGGGTGACCGGCGAGGCGCGGGCCTACCGGGAA
TTCGCAGAGGATGTGGTCGGCTTCGTGAAGTTCCAGGGTGGCCATATGGGCTCGACTGACGGCAACCCGCTGCGCGTGAC
AGATCAGTTCTTCCTTGGGCCATCGCTGGTGCGCGGCTTCGCCGTCAACGGCATCGGCCCGCGCGATGTCGGCACGGGTG
ATGCGCGCTCCAACGCCCTCGGCGGCACCACCTATTTCGGCGGCACGCTCGAGGTTCAATTTCCGCTGCCCGGAATACCG
AAAGATCTCGGCCTGAAGGGTGCGCTGTTCGCCGATGCCGGCACGCTGTTCGGATACAAAGGCAAGCGCAGCTTCGACGT
GAACGGCGACGGCTTCATCAACGGTTACAGCCCGACCGGCGGATGCAATTACAGCTCCCCCTCGATCGGCGTGCAGCCCG
AATGCGTGAACGTGCGCGATAAGGCGACGATCCGCTCCTCGATCGGCGCTTCAATACTCTGGAACTCGCCACTTGGGCCG
ATCCGCTTCGACTATGCCTACGCTTTGACCAAAGACGAAGGCACCCGCGTCTACGGAGCGGATGGTACCTATTACGGCCG
GGTCGGCAAGGATCAGACGCAGGCGTTCCGCTTCTCAGGCGGTACGAAGTTCTGA

Upstream 100 bases:

>100_bases
GGCTCGTCGGCGAGCAGCAGTTGGAGGTCCGGAACCGAGTGGATGTGCGGAGCCGCACGATGTCGAAGCGCAGCCGGTTG
ACGTGTGAAATTTTCCCACG

Downstream 100 bases:

>100_bases
CAGCGAAACCACGATTCCAGTTGTGCTCACAGCTGGCGCTGGTTGTGCAAGAGAGCCTCCGATCTGCCGTTCCATAGGAA
GTGCAGACCTATCGATAATT

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 844; Mature: 844

Protein sequence:

>844_residues
MIAGPPAASSVSVIHFGFWRSCLVGIVALPHLAGGAVAAQLLIEGNRRVDAEVIRSIVANAPADARRELMASGYFSDVTL
TQANGRTLVRVQEKGVVGRVFFEGNKKVEKATLEATIVTRGAAPLDPAQVAADVERIRDVYKRSGRGTAKVSYRLVDLPS
GRSDVIYAIDEGDKTGIREIHFIGNQAYSESTLKGLMSSSEMNFLSFIKTSDVYDPDRISADLDIVRRYYLKNGYADFRV
VNADARYVETGDDAGWVINVTVEEGEQYTVGAVAVDPRIAGIDREALDGQIRAQVGDVYNAEDVEKTLVGVTNEVNRQGY
PFAQVRPTGQRDRATHQVALGFVVEDGPRVYVERINIRGNTRTRDYVIRRELDLTEGDAYNRVLVDRAERRLNGLGFFKK
VRFSNEPGSAPDRVIVNIDVEDQPTGSFSVAGGYSTQDGIIGEVSVSESNFLGRGQYVRLAVQAGQYARGVDVSFTEPYF
LGYRMAAGIDAFYKYSNLARYSRYETTVVGTQLRLGLPVTDEFGVTFRYSIYNTDLKVPNTLSQPYNDCSSPISGYTAVN
AAGQATYPACTYDGEASIAIKSAQGSTLTSLVGATLAYSTLDNLQRPTNGFYAELKPEIAGLGGDSNFYRVTGEARAYRE
FAEDVVGFVKFQGGHMGSTDGNPLRVTDQFFLGPSLVRGFAVNGIGPRDVGTGDARSNALGGTTYFGGTLEVQFPLPGIP
KDLGLKGALFADAGTLFGYKGKRSFDVNGDGFINGYSPTGGCNYSSPSIGVQPECVNVRDKATIRSSIGASILWNSPLGP
IRFDYAYALTKDEGTRVYGADGTYYGRVGKDQTQAFRFSGGTKF

Sequences:

>Translated_844_residues
MIAGPPAASSVSVIHFGFWRSCLVGIVALPHLAGGAVAAQLLIEGNRRVDAEVIRSIVANAPADARRELMASGYFSDVTL
TQANGRTLVRVQEKGVVGRVFFEGNKKVEKATLEATIVTRGAAPLDPAQVAADVERIRDVYKRSGRGTAKVSYRLVDLPS
GRSDVIYAIDEGDKTGIREIHFIGNQAYSESTLKGLMSSSEMNFLSFIKTSDVYDPDRISADLDIVRRYYLKNGYADFRV
VNADARYVETGDDAGWVINVTVEEGEQYTVGAVAVDPRIAGIDREALDGQIRAQVGDVYNAEDVEKTLVGVTNEVNRQGY
PFAQVRPTGQRDRATHQVALGFVVEDGPRVYVERINIRGNTRTRDYVIRRELDLTEGDAYNRVLVDRAERRLNGLGFFKK
VRFSNEPGSAPDRVIVNIDVEDQPTGSFSVAGGYSTQDGIIGEVSVSESNFLGRGQYVRLAVQAGQYARGVDVSFTEPYF
LGYRMAAGIDAFYKYSNLARYSRYETTVVGTQLRLGLPVTDEFGVTFRYSIYNTDLKVPNTLSQPYNDCSSPISGYTAVN
AAGQATYPACTYDGEASIAIKSAQGSTLTSLVGATLAYSTLDNLQRPTNGFYAELKPEIAGLGGDSNFYRVTGEARAYRE
FAEDVVGFVKFQGGHMGSTDGNPLRVTDQFFLGPSLVRGFAVNGIGPRDVGTGDARSNALGGTTYFGGTLEVQFPLPGIP
KDLGLKGALFADAGTLFGYKGKRSFDVNGDGFINGYSPTGGCNYSSPSIGVQPECVNVRDKATIRSSIGASILWNSPLGP
IRFDYAYALTKDEGTRVYGADGTYYGRVGKDQTQAFRFSGGTKF
>Mature_844_residues
MIAGPPAASSVSVIHFGFWRSCLVGIVALPHLAGGAVAAQLLIEGNRRVDAEVIRSIVANAPADARRELMASGYFSDVTL
TQANGRTLVRVQEKGVVGRVFFEGNKKVEKATLEATIVTRGAAPLDPAQVAADVERIRDVYKRSGRGTAKVSYRLVDLPS
GRSDVIYAIDEGDKTGIREIHFIGNQAYSESTLKGLMSSSEMNFLSFIKTSDVYDPDRISADLDIVRRYYLKNGYADFRV
VNADARYVETGDDAGWVINVTVEEGEQYTVGAVAVDPRIAGIDREALDGQIRAQVGDVYNAEDVEKTLVGVTNEVNRQGY
PFAQVRPTGQRDRATHQVALGFVVEDGPRVYVERINIRGNTRTRDYVIRRELDLTEGDAYNRVLVDRAERRLNGLGFFKK
VRFSNEPGSAPDRVIVNIDVEDQPTGSFSVAGGYSTQDGIIGEVSVSESNFLGRGQYVRLAVQAGQYARGVDVSFTEPYF
LGYRMAAGIDAFYKYSNLARYSRYETTVVGTQLRLGLPVTDEFGVTFRYSIYNTDLKVPNTLSQPYNDCSSPISGYTAVN
AAGQATYPACTYDGEASIAIKSAQGSTLTSLVGATLAYSTLDNLQRPTNGFYAELKPEIAGLGGDSNFYRVTGEARAYRE
FAEDVVGFVKFQGGHMGSTDGNPLRVTDQFFLGPSLVRGFAVNGIGPRDVGTGDARSNALGGTTYFGGTLEVQFPLPGIP
KDLGLKGALFADAGTLFGYKGKRSFDVNGDGFINGYSPTGGCNYSSPSIGVQPECVNVRDKATIRSSIGASILWNSPLGP
IRFDYAYALTKDEGTRVYGADGTYYGRVGKDQTQAFRFSGGTKF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=434, Percent_Identity=23.0414746543779, Blast_Score=74, Evalue=8e-13,
Organism=Escherichia coli, GI1786374, Length=830, Percent_Identity=28.5542168674699, Blast_Score=236, Evalue=3e-63,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 91440; Mature: 91440

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGPPAASSVSVIHFGFWRSCLVGIVALPHLAGGAVAAQLLIEGNRRVDAEVIRSIVAN
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHC
APADARRELMASGYFSDVTLTQANGRTLVRVQEKGVVGRVFFEGNKKVEKATLEATIVTR
CCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEEEEEC
GAAPLDPAQVAADVERIRDVYKRSGRGTAKVSYRLVDLPSGRSDVIYAIDEGDKTGIREI
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEE
HFIGNQAYSESTLKGLMSSSEMNFLSFIKTSDVYDPDRISADLDIVRRYYLKNGYADFRV
EEECCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHHCCCCCEEE
VNADARYVETGDDAGWVINVTVEEGEQYTVGAVAVDPRIAGIDREALDGQIRAQVGDVYN
EECCCEEEECCCCCCEEEEEEEECCCEEEEEEEEECCEEECCCHHHHCCEEEEHHCCCCC
AEDVEKTLVGVTNEVNRQGYPFAQVRPTGQRDRATHQVALGFVVEDGPRVYVERINIRGN
HHHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCC
TRTRDYVIRRELDLTEGDAYNRVLVDRAERRLNGLGFFKKVRFSNEPGSAPDRVIVNIDV
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEC
EDQPTGSFSVAGGYSTQDGIIGEVSVSESNFLGRGQYVRLAVQAGQYARGVDVSFTEPYF
CCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHH
LGYRMAAGIDAFYKYSNLARYSRYETTVVGTQLRLGLPVTDEFGVTFRYSIYNTDLKVPN
HHHHHHHCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC
TLSQPYNDCSSPISGYTAVNAAGQATYPACTYDGEASIAIKSAQGSTLTSLVGATLAYST
HHCCCHHHHCCCCCCCEEECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHH
LDNLQRPTNGFYAELKPEIAGLGGDSNFYRVTGEARAYREFAEDVVGFVKFQGGHMGSTD
HHHHCCCCCCCEEEECCEEEECCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCCCC
GNPLRVTDQFFLGPSLVRGFAVNGIGPRDVGTGDARSNALGGTTYFGGTLEVQFPLPGIP
CCEEEEEEEHHCCHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCC
KDLGLKGALFADAGTLFGYKGKRSFDVNGDGFINGYSPTGGCNYSSPSIGVQPECVNVRD
HHHCCCEEEEECCCCEEECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCH
KATIRSSIGASILWNSPLGPIRFDYAYALTKDEGTRVYGADGTYYGRVGKDQTQAFRFSG
HHHHHHHCCCEEEECCCCCCEEEEEEEEEECCCCCEEEECCCCEEECCCCCCCCEEEECC
GTKF
CCCC
>Mature Secondary Structure
MIAGPPAASSVSVIHFGFWRSCLVGIVALPHLAGGAVAAQLLIEGNRRVDAEVIRSIVAN
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHC
APADARRELMASGYFSDVTLTQANGRTLVRVQEKGVVGRVFFEGNKKVEKATLEATIVTR
CCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEEEEEC
GAAPLDPAQVAADVERIRDVYKRSGRGTAKVSYRLVDLPSGRSDVIYAIDEGDKTGIREI
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEE
HFIGNQAYSESTLKGLMSSSEMNFLSFIKTSDVYDPDRISADLDIVRRYYLKNGYADFRV
EEECCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHHCCCCCEEE
VNADARYVETGDDAGWVINVTVEEGEQYTVGAVAVDPRIAGIDREALDGQIRAQVGDVYN
EECCCEEEECCCCCCEEEEEEEECCCEEEEEEEEECCEEECCCHHHHCCEEEEHHCCCCC
AEDVEKTLVGVTNEVNRQGYPFAQVRPTGQRDRATHQVALGFVVEDGPRVYVERINIRGN
HHHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCC
TRTRDYVIRRELDLTEGDAYNRVLVDRAERRLNGLGFFKKVRFSNEPGSAPDRVIVNIDV
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEC
EDQPTGSFSVAGGYSTQDGIIGEVSVSESNFLGRGQYVRLAVQAGQYARGVDVSFTEPYF
CCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHH
LGYRMAAGIDAFYKYSNLARYSRYETTVVGTQLRLGLPVTDEFGVTFRYSIYNTDLKVPN
HHHHHHHCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCC
TLSQPYNDCSSPISGYTAVNAAGQATYPACTYDGEASIAIKSAQGSTLTSLVGATLAYST
HHCCCHHHHCCCCCCCEEECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHH
LDNLQRPTNGFYAELKPEIAGLGGDSNFYRVTGEARAYREFAEDVVGFVKFQGGHMGSTD
HHHHCCCCCCCEEEECCEEEECCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCCCC
GNPLRVTDQFFLGPSLVRGFAVNGIGPRDVGTGDARSNALGGTTYFGGTLEVQFPLPGIP
CCEEEEEEEHHCCHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCC
KDLGLKGALFADAGTLFGYKGKRSFDVNGDGFINGYSPTGGCNYSSPSIGVQPECVNVRD
HHHCCCEEEEECCCCEEECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCH
KATIRSSIGASILWNSPLGPIRFDYAYALTKDEGTRVYGADGTYYGRVGKDQTQAFRFSG
HHHHHHHCCCEEEECCCCCCEEEEEEEEEECCCCCEEEECCCCEEECCCCCCCCEEEECC
GTKF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]