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The map label for this gene is yoqW [H]

Identifier: 218532570

GI number: 218532570

Start: 4964962

End: 4965693

Strand: Reverse

Name: yoqW [H]

Synonym: Mchl_4684

Alternate gene names: 218532570

Gene position: 4965693-4964962 (Counterclockwise)

Preceding gene: 218532574

Following gene: 218532568

Centisome position: 85.94

GC content: 71.17

Gene sequence:

>732_bases
ATGTGCGGACGCTTCTTCATCGGCCAGCCGCCGGAGGTCTACCGCGCCTTCTACGGCTATTCCGAGCAGCCGAATTTCCC
CGGCCGCTTCAACGTGGCGCCGACCCAGCCGGTGCCCGTCGTGATCCGCGAGAGCGGCGAGCGGCATTTCCGGCTGATGC
GCTGGGGACTCTGGCCGACCTGGCTCAAGGATCCGTCGGACTTTCCGACCCTGTTCAACGCCCGCATCGAGACGGCGGCC
GAGAAGCCGGCCTTCCGCGGGGCGCTGCGCCACCGCCGCTGCGTGTTTCTGGCCGACGGCTTCTACGAATGGCGCCGCGA
GGGGACCGGCAAGGCCGCGACGAAGATGCCGTTCGCGGTGCGCCGCACCGACGGGGCGCCGATGGCGTTCGCCGGCCTGT
GGGAGCCGTGGATGGGCGCGGACGGCTCGGAAGTCGATACGGCGGCGATCATCACCTGCTCGGCCAACGGCACCCTGAGC
GCGATCCACGAGCGGATGCCGGCGATCCTGGCTCCGGAATCTATCGGCGCGTGGCTCGATGCGGCGGTGGACGCGCCCGA
GGCGGCCCGTCTCTGCCGGCCCTGCCCGGACGAATGGCTGCGGCTCGATCCGGTGAGCGAGCGGGTCAACAACGCGCGCA
ACGACGATGCCGGGCTGCCCGAACCGGTGGCCCCGCCCGCAAGCCGCAGGGGTCCGGCGAAGGCCGCGATCGTGCAGGGC
GAGCTGTTCTGA

Upstream 100 bases:

>100_bases
GGGAGCCTGTTACCTCATCTCATCCAACCCTCCGTCATCGCTGTGACTCGGGCACCCGCTGCGCTTGATCCCGCCCTCGC
CCGGAGCCCATATCGCGCCC

Downstream 100 bases:

>100_bases
CGCGCTCTCCGCTCAGGCGGCCGCGCCGCTTTCCCCGCCCACCTCTTCCCCGAACCGTTCGGCGGCATAGTCGTCGAGGT
TGAACGCGTCGTCGGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MCGRFFIGQPPEVYRAFYGYSEQPNFPGRFNVAPTQPVPVVIRESGERHFRLMRWGLWPTWLKDPSDFPTLFNARIETAA
EKPAFRGALRHRRCVFLADGFYEWRREGTGKAATKMPFAVRRTDGAPMAFAGLWEPWMGADGSEVDTAAIITCSANGTLS
AIHERMPAILAPESIGAWLDAAVDAPEAARLCRPCPDEWLRLDPVSERVNNARNDDAGLPEPVAPPASRRGPAKAAIVQG
ELF

Sequences:

>Translated_243_residues
MCGRFFIGQPPEVYRAFYGYSEQPNFPGRFNVAPTQPVPVVIRESGERHFRLMRWGLWPTWLKDPSDFPTLFNARIETAA
EKPAFRGALRHRRCVFLADGFYEWRREGTGKAATKMPFAVRRTDGAPMAFAGLWEPWMGADGSEVDTAAIITCSANGTLS
AIHERMPAILAPESIGAWLDAAVDAPEAARLCRPCPDEWLRLDPVSERVNNARNDDAGLPEPVAPPASRRGPAKAAIVQG
ELF
>Mature_243_residues
MCGRFFIGQPPEVYRAFYGYSEQPNFPGRFNVAPTQPVPVVIRESGERHFRLMRWGLWPTWLKDPSDFPTLFNARIETAA
EKPAFRGALRHRRCVFLADGFYEWRREGTGKAATKMPFAVRRTDGAPMAFAGLWEPWMGADGSEVDTAAIITCSANGTLS
AIHERMPAILAPESIGAWLDAAVDAPEAARLCRPCPDEWLRLDPVSERVNNARNDDAGLPEPVAPPASRRGPAKAAIVQG
ELF

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=274, Percent_Identity=32.8467153284672, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI54607104, Length=274, Percent_Identity=32.8467153284672, Blast_Score=99, Evalue=3e-21,
Organism=Escherichia coli, GI48994894, Length=231, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6323761, Length=211, Percent_Identity=31.7535545023697, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355761, Length=244, Percent_Identity=29.0983606557377, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 26940; Mature: 26940

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFFIGQPPEVYRAFYGYSEQPNFPGRFNVAPTQPVPVVIRESGERHFRLMRWGLWPT
CCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCHHEEHHHHCCCHH
WLKDPSDFPTLFNARIETAAEKPAFRGALRHRRCVFLADGFYEWRREGTGKAATKMPFAV
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCHHHHHHCCCCCCHHCCCEEE
RRTDGAPMAFAGLWEPWMGADGSEVDTAAIITCSANGTLSAIHERMPAILAPESIGAWLD
EECCCCCEEHHHCCCHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEECCHHHHHHHH
AAVDAPEAARLCRPCPDEWLRLDPVSERVNNARNDDAGLPEPVAPPASRRGPAKAAIVQG
HHCCCHHHHHHHCCCCHHHEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
ELF
CCC
>Mature Secondary Structure
MCGRFFIGQPPEVYRAFYGYSEQPNFPGRFNVAPTQPVPVVIRESGERHFRLMRWGLWPT
CCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCHHEEHHHHCCCHH
WLKDPSDFPTLFNARIETAAEKPAFRGALRHRRCVFLADGFYEWRREGTGKAATKMPFAV
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCHHHHHHCCCCCCHHCCCEEE
RRTDGAPMAFAGLWEPWMGADGSEVDTAAIITCSANGTLSAIHERMPAILAPESIGAWLD
EECCCCCEEHHHCCCHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEECCHHHHHHHH
AAVDAPEAARLCRPCPDEWLRLDPVSERVNNARNDDAGLPEPVAPPASRRGPAKAAIVQG
HHCCCHHHHHHHCCCCHHHEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
ELF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]