| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is mutL [H]
Identifier: 218532518
GI number: 218532518
Start: 4909844
End: 4911829
Strand: Reverse
Name: mutL [H]
Synonym: Mchl_4632
Alternate gene names: 218532518
Gene position: 4911829-4909844 (Counterclockwise)
Preceding gene: 218532519
Following gene: 218532513
Centisome position: 85.01
GC content: 74.97
Gene sequence:
>1986_bases ATGTCCGCCACCCCCGACCTTCGCGATCCGCCGCCCGCGCATGTGCGCCGCCTCGATCCGATCCTGGTCGATCGCATCGC CGCGGGCGAGGTGGTCGAGCGGCCGGCCTCGGCGGTCAAGGAACTGGTCGAGAACGCGATCGATGCCGGCGCGCGCAGCA TCGAGGTGGCGATCGAGGGCGGCGGGCGCCGCCTGATCCGCGTCATCGACGACGGCATCGGCATGGGGCCCGACGACCTC GCGCTCGCGGTCGAGCGCCACGCCACGTCGAAGCTGCCCGACGGCGACCTGACCCGGATCGGCTCGCTCGGCTTTCGCGG CGAGGCGCTGCCCTCGATCGGCGCGGTCTCGCGGCTCACGATCACCTCGCGCACCGCCGACGGCGAGGGGGTGAGCCTCA CCCTCGATTCCGGCGTCAAGGGGCCGGTGCGCCCGGCGCCCGCCGCGCGCGGCACCCGCATCGAGGTCACCGAGCTGTTC GCCGCGACCCCGGCCCGGCTGAAATTCCTGAAGACCGACCGGGCCGAGACGGCCGCCGTCTCCGAAATCCTGCGCCGGCT CGCGGTGGCGCAGCCGCAGATCCGCTTCACCCTGCGCACCGAGAGCGGCAGCCCGACGGTGTTTCCCGCCGAGAGCGAGC CGGGCCCGGCGGCCCTGCTGCGCCGGCTCGGAGCCGTGCTCGGCCCCGACTTCCCCGGCAATGCCGTGCCCGTCGACATG GCCCGCGAGGGCTTCGCGCTTGCCGGCCATGTCGGCCTGCCGACCTTCCACCGCGGGGCGGCGAGCCACATCTACTTCGT CGTCAACGGGCGCCCGGTGCGCGACCGGCTCCTGCTCGGGGCCGTGCGCGGAGCTTATGCCGACACCATGAGCTCCGACC GCCACCCGGTGCTCGCGCTCCATCTCACCTGCGATCCCGCCCTCGTCGATGTGAACGTGCACCCGGCCAAGACCGAGCTG CGCTTCCGCGAGCCGGGGCTGGTGCGAGCGCTGATCGTCAGCGCGATCCACGAGGCTTTGCGCCGGGCTGGCGCCCGGTC TTCCAGCACGGGCACCCAGGCCGCCCTCGACGCGCTGCGGGCCGGCGCCGGCATGGGGGGCGCCCCGCCGATGGCGGGGG TGGGCCGGTTCGCCGTGCATTCGGGCGCCTCCACTGCCAGCGCCCTGAACCCCCGCCCGGCGAGCCGCCTGTTCTCCGGC CCCTCGGTGGCCGCACCCGCGGGCTACCGCCCGGCGCTGCGCCCGGCCTTCACCGAGGACCATCCAGGCTTTGCCGAGAC GCCGCAGGCTTTGTTCTCCGCCGACCTCGCCCCGCCCGGCGCCGACCTGCGGCCCGATCCGGAGGCGGGCTCGGAGGCCG AGACCCATCCCGAGACCCACCCGCTGGGTGCCGCCCGCGCGCAGATCCACGAAACCTACATCGTCGCCCAGACCCGCGAT GGGATCGTGCTGGTCGATCAGCACGCCGCCCACGAGCGGCTCGTCTACGAGCGGCTGAAGCGCGAGCGGGCCGGCGGCGG CGTGCTCGCCCAGGGGCTCCTGATCCCCGACGTGGTCGAGATGGCGCCCGAGGAGGCCGACCGCCTCGTCGAGGCGGCGC CCGAGCTGGAGCGGCTGGGCCTCACCCTGGAGGCGTTCGGCCCCGGCGCCGTGCTGGTGCGCTCGGTGCCGTCGGCGCTC GCGGGCGGCTCGGTGAAGGGGCTCGTGCTCGACGTGCTCGACGCGTTGGCGGCCAGCGGCGTCGAGGAGGGCGGCCCGGC CGGCGCGGGCGATCCCGATCCGGTGAGCCGGCGCCTCGACGCGATCCTCTCGCGGATGAGCTGCCACGGCTCGATCCGCG CCGGCCGCCGCCTCAAGCCGGAGGAGATGAACGCCCTGCTGCGCGAGATGGAGGCGACGCCGCTCTCCGGCTCGTGCAAC CACGGCCGCCCGACCTTCGTGAGCCTCGGACTCGCCGATATCGAGCGGCTGTTCGGGCGGCGGTGA
Upstream 100 bases:
>100_bases ACCTCAGGGTGAGGCCGAGCCGGGAGTGAGGGAGAGGCTGTTCGCAAACGTCCGCCTTCGCCTATCGGGCGGGCGGCAGG CCGCCTATATTTCGCGAGCC
Downstream 100 bases:
>100_bases CGGCGTCCTCCTCAGGAAGACGCCGGGCTCGGGCGTAAAGCCGGCAGGACGCCGCCCCGCGGTCAGGCTGGGATGGCGAC CGCCAGGGCCGCCGCGCTCG
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MSATPDLRDPPPAHVRRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVIDDGIGMGPDDL ALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGEGVSLTLDSGVKGPVRPAPAARGTRIEVTELF AATPARLKFLKTDRAETAAVSEILRRLAVAQPQIRFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDM AREGFALAGHVGLPTFHRGAASHIYFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVHPAKTEL RFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGAGMGGAPPMAGVGRFAVHSGASTASALNPRPASRLFSG PSVAAPAGYRPALRPAFTEDHPGFAETPQALFSADLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRD GIVLVDQHAAHERLVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLVRSVPSAL AGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIRAGRRLKPEEMNALLREMEATPLSGSCN HGRPTFVSLGLADIERLFGRR
Sequences:
>Translated_661_residues MSATPDLRDPPPAHVRRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVIDDGIGMGPDDL ALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGEGVSLTLDSGVKGPVRPAPAARGTRIEVTELF AATPARLKFLKTDRAETAAVSEILRRLAVAQPQIRFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDM AREGFALAGHVGLPTFHRGAASHIYFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVHPAKTEL RFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGAGMGGAPPMAGVGRFAVHSGASTASALNPRPASRLFSG PSVAAPAGYRPALRPAFTEDHPGFAETPQALFSADLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRD GIVLVDQHAAHERLVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLVRSVPSAL AGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIRAGRRLKPEEMNALLREMEATPLSGSCN HGRPTFVSLGLADIERLFGRR >Mature_660_residues SATPDLRDPPPAHVRRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVIDDGIGMGPDDLA LAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGEGVSLTLDSGVKGPVRPAPAARGTRIEVTELFA ATPARLKFLKTDRAETAAVSEILRRLAVAQPQIRFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDMA REGFALAGHVGLPTFHRGAASHIYFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVHPAKTELR FREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGAGMGGAPPMAGVGRFAVHSGASTASALNPRPASRLFSGP SVAAPAGYRPALRPAFTEDHPGFAETPQALFSADLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRDG IVLVDQHAAHERLVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLVRSVPSALA GGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIRAGRRLKPEEMNALLREMEATPLSGSCNH GRPTFVSLGLADIERLFGRR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=318, Percent_Identity=36.1635220125786, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI310128478, Length=351, Percent_Identity=28.2051282051282, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4505913, Length=350, Percent_Identity=28, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4505911, Length=341, Percent_Identity=28.7390029325513, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI189458898, Length=341, Percent_Identity=28.7390029325513, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI310128480, Length=311, Percent_Identity=26.0450160771704, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI189458896, Length=333, Percent_Identity=27.9279279279279, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI263191589, Length=224, Percent_Identity=30.3571428571429, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI1790612, Length=581, Percent_Identity=35.4561101549053, Blast_Score=258, Evalue=1e-69, Organism=Caenorhabditis elegans, GI71991825, Length=329, Percent_Identity=34.9544072948328, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17562796, Length=371, Percent_Identity=26.4150943396226, Blast_Score=108, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6323819, Length=357, Percent_Identity=31.3725490196078, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6324247, Length=342, Percent_Identity=26.0233918128655, Blast_Score=113, Evalue=9e-26, Organism=Saccharomyces cerevisiae, GI6325093, Length=740, Percent_Identity=22.4324324324324, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI17136968, Length=345, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI17136970, Length=370, Percent_Identity=26.2162162162162, Blast_Score=98, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 69154; Mature: 69022
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPDLRDPPPAHVRRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEG CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC GGRRLIRVIDDGIGMGPDDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLT CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEE ITSRTADGEGVSLTLDSGVKGPVRPAPAARGTRIEVTELFAATPARLKFLKTDRAETAAV EEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHEEHHCCCHHHHHH SEILRRLAVAQPQIRFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDM HHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHH AREGFALAGHVGLPTFHRGAASHIYFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLAL CCCCCEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE HLTCDPALVDVNVHPAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALR EEECCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGAGMGGAPPMAGVGRFAVHSGASTASALNPRPASRLFSGPSVAAPAGYRPALRPAFTED HCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC HPGFAETPQALFSADLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEECCC GIVLVDQHAAHERLVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLG CEEEEECCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHCHHHHHHHHHHCCCHHHHC LTLEAFGPGAVLVRSVPSALAGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLD CEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH AILSRMSCHGSIRAGRRLKPEEMNALLREMEATPLSGSCNHGRPTFVSLGLADIERLFGR HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHCC R C >Mature Secondary Structure SATPDLRDPPPAHVRRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEG CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC GGRRLIRVIDDGIGMGPDDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLT CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEE ITSRTADGEGVSLTLDSGVKGPVRPAPAARGTRIEVTELFAATPARLKFLKTDRAETAAV EEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHEEHHCCCHHHHHH SEILRRLAVAQPQIRFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDM HHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHH AREGFALAGHVGLPTFHRGAASHIYFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLAL CCCCCEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE HLTCDPALVDVNVHPAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALR EEECCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGAGMGGAPPMAGVGRFAVHSGASTASALNPRPASRLFSGPSVAAPAGYRPALRPAFTED HCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC HPGFAETPQALFSADLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEECCC GIVLVDQHAAHERLVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLG CEEEEECCHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHCHHHHHHHHHHCCCHHHHC LTLEAFGPGAVLVRSVPSALAGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLD CEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH AILSRMSCHGSIRAGRRLKPEEMNALLREMEATPLSGSCNHGRPTFVSLGLADIERLFGR HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]