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The map label for this gene is fliN [H]

Identifier: 218532345

GI number: 218532345

Start: 4717396

End: 4717743

Strand: Reverse

Name: fliN [H]

Synonym: Mchl_4457

Alternate gene names: 218532345

Gene position: 4717743-4717396 (Counterclockwise)

Preceding gene: 218532346

Following gene: 218532344

Centisome position: 81.65

GC content: 67.82

Gene sequence:

>348_bases
ATGTCGAGCGACGATTTCAGCCTGCCCCAGCTCAACGAAGGCGACCTGCCCTACGACGAGGGCGGCCCCGGTTCCGTCCG
CGACGCGCCGACGAGCCCGAAGAATGCGGCGGACCTCGAACAGGTCTTCGACGTGCCGGTGGTGGTCTCGGCGGTGCTGG
GCTCCTCGCGCATGCCGATCGGCGACCTCCTGCGGCTCGGCCCCGGCGCTGTGCTCGAACTCGACCGCAAGGTCGGCGAG
GCCATCGACATCTTCGTCAACAACCGCCTCGTCGCCCGCGGCGAGGTCGTGCTGGTCGAGGAGCGCCTCGGCGTCACCAT
GACCGAGATCATCAAGAACGATCACTGA

Upstream 100 bases:

>100_bases
AATGGGCCGATGGCGGCGTCGTGCGCGAGCGCGCCCGCATCGAGGCCGCGGTCGAGGCCGCCCTTTCCCCCAATTTCGCC
AGCGCAGAGGCCTGAGCCCG

Downstream 100 bases:

>100_bases
CCCTTTGGTGTGTCGATCCCGGCCTGCGGGTCGGGATCGACACGTCCGGCGGACGGCCACCGCCCCGCCTTCGCGGGGGC
CGGCCTGCGATGAGAGATCA

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSSDDFSLPQLNEGDLPYDEGGPGSVRDAPTSPKNAADLEQVFDVPVVVSAVLGSSRMPIGDLLRLGPGAVLELDRKVGE
AIDIFVNNRLVARGEVVLVEERLGVTMTEIIKNDH

Sequences:

>Translated_115_residues
MSSDDFSLPQLNEGDLPYDEGGPGSVRDAPTSPKNAADLEQVFDVPVVVSAVLGSSRMPIGDLLRLGPGAVLELDRKVGE
AIDIFVNNRLVARGEVVLVEERLGVTMTEIIKNDH
>Mature_114_residues
SSDDFSLPQLNEGDLPYDEGGPGSVRDAPTSPKNAADLEQVFDVPVVVSAVLGSSRMPIGDLLRLGPGAVLELDRKVGEA
IDIFVNNRLVARGEVVLVEERLGVTMTEIIKNDH

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=74, Percent_Identity=45.945945945946, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 12312; Mature: 12181

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDDFSLPQLNEGDLPYDEGGPGSVRDAPTSPKNAADLEQVFDVPVVVSAVLGSSRMPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCH
GDLLRLGPGAVLELDRKVGEAIDIFVNNRLVARGEVVLVEERLGVTMTEIIKNDH
HHHHHCCCCCEEHHHHHHCCEEEEEECCEEECCCCEEEEECCCCCHHHHHHCCCC
>Mature Secondary Structure 
SSDDFSLPQLNEGDLPYDEGGPGSVRDAPTSPKNAADLEQVFDVPVVVSAVLGSSRMPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCH
GDLLRLGPGAVLELDRKVGEAIDIFVNNRLVARGEVVLVEERLGVTMTEIIKNDH
HHHHHCCCCCEEHHHHHHCCEEEEEECCEEECCCCEEEEECCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002583; 11259647; 2315326; 1732219 [H]