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The map label for this gene is yedY [H]

Identifier: 218532060

GI number: 218532060

Start: 4381078

End: 4381821

Strand: Reverse

Name: yedY [H]

Synonym: Mchl_4154

Alternate gene names: 218532060

Gene position: 4381821-4381078 (Counterclockwise)

Preceding gene: 218532061

Following gene: 218532056

Centisome position: 75.84

GC content: 69.49

Gene sequence:

>744_bases
ATGAGCGATCTCACCCGCCGCAGGCTGATGCTCGGCTCCTCGGCACTGGGGATCGGCGGTGTGCTCGGCGGCTGCGAGCT
GATCGAGAGCGGCCCGCGTCGATCAGGCCTCTACGGGTTGAGCGACACCCTGACGCTGGCCACCCAGCGCTTCCTCCTGC
GCGACCAGCCACTGGTGCGGGAGTTCGGGCCGGAGGCGATCTCGGCGGTGTTTCCCACCATCAACACCACCGATCCGGAC
AACCCCGATTACCGGCGCTCGAAGGCGACCGGGTTCTCCGACTGGCGCCTGCCGGTGAGCGGCCTCGTCGAGCGCCCCGC
CGCCTTCACACTGGCCGAGCTGAGGGCAATGCCGGCCCGCACCCAGGTGACGCTCCATAGTTGCGAGCAGGGCTGGTCGG
CCATCGGCGGCTGGACAGGCGTGCCGCTGTCCCACGTTCTGGCGAGCGTCGGGCTCAAACCCGAGGCGCGCTTCATCGTG
ATCCGCACGGTGGACGGCTGGTGGGACAGCTACGACCTGTTCGACGCCCTGCACCCGCAGACGATCCTGGCCTACGGCAT
GAACGGCGGCGACCTGCCCGTGGCCCACGGCGCGCCGGTGCGCCTGCGGGTCGAGCGCCAACTCGGCTACAAGTCGCTCA
AATACCTCGCCAGCATCGAGGCCACCGACCGCGTGGACGGGCTCGGCCAGGGCCGGGGCAGCATGGTCTCGGAGATGGGA
TTTTCCTGGTACGCGGGGATCTGA

Upstream 100 bases:

>100_bases
AGGTGCTCGCCAACGGGCCGCTCGACCTGATGCGGGGCATGATCACCGGGCGCTCCGCCCGGCCAAAATCCGGGCCGGCA
CCGTCAGAGGAGGACCCGCG

Downstream 100 bases:

>100_bases
GAGGTCGGCTCAGCCGATCAGCGGCGTGCAGACCGCCCGCCCCTGCCCCGGCAGCGGCACCACCGCGACCTCGACCCCGT
AGAGCAGCCGCAGGGTCTCC

Product: oxidoreductase molybdopterin binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSDLTRRRLMLGSSALGIGGVLGGCELIESGPRRSGLYGLSDTLTLATQRFLLRDQPLVREFGPEAISAVFPTINTTDPD
NPDYRRSKATGFSDWRLPVSGLVERPAAFTLAELRAMPARTQVTLHSCEQGWSAIGGWTGVPLSHVLASVGLKPEARFIV
IRTVDGWWDSYDLFDALHPQTILAYGMNGGDLPVAHGAPVRLRVERQLGYKSLKYLASIEATDRVDGLGQGRGSMVSEMG
FSWYAGI

Sequences:

>Translated_247_residues
MSDLTRRRLMLGSSALGIGGVLGGCELIESGPRRSGLYGLSDTLTLATQRFLLRDQPLVREFGPEAISAVFPTINTTDPD
NPDYRRSKATGFSDWRLPVSGLVERPAAFTLAELRAMPARTQVTLHSCEQGWSAIGGWTGVPLSHVLASVGLKPEARFIV
IRTVDGWWDSYDLFDALHPQTILAYGMNGGDLPVAHGAPVRLRVERQLGYKSLKYLASIEATDRVDGLGQGRGSMVSEMG
FSWYAGI
>Mature_246_residues
SDLTRRRLMLGSSALGIGGVLGGCELIESGPRRSGLYGLSDTLTLATQRFLLRDQPLVREFGPEAISAVFPTINTTDPDN
PDYRRSKATGFSDWRLPVSGLVERPAAFTLAELRAMPARTQVTLHSCEQGWSAIGGWTGVPLSHVLASVGLKPEARFIVI
RTVDGWWDSYDLFDALHPQTILAYGMNGGDLPVAHGAPVRLRVERQLGYKSLKYLASIEATDRVDGLGQGRGSMVSEMGF
SWYAGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=148, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 26867; Mature: 26736

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTRRRLMLGSSALGIGGVLGGCELIESGPRRSGLYGLSDTLTLATQRFLLRDQPLVR
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH
EFGPEAISAVFPTINTTDPDNPDYRRSKATGFSDWRLPVSGLVERPAAFTLAELRAMPAR
HHCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCH
TQVTLHSCEQGWSAIGGWTGVPLSHVLASVGLKPEARFIVIRTVDGWWDSYDLFDALHPQ
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCCC
TILAYGMNGGDLPVAHGAPVRLRVERQLGYKSLKYLASIEATDRVDGLGQGRGSMVSEMG
EEEEECCCCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCC
FSWYAGI
CHHCCCC
>Mature Secondary Structure 
SDLTRRRLMLGSSALGIGGVLGGCELIESGPRRSGLYGLSDTLTLATQRFLLRDQPLVR
CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH
EFGPEAISAVFPTINTTDPDNPDYRRSKATGFSDWRLPVSGLVERPAAFTLAELRAMPAR
HHCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCH
TQVTLHSCEQGWSAIGGWTGVPLSHVLASVGLKPEARFIVIRTVDGWWDSYDLFDALHPQ
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCCC
TILAYGMNGGDLPVAHGAPVRLRVERQLGYKSLKYLASIEATDRVDGLGQGRGSMVSEMG
EEEEECCCCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCC
FSWYAGI
CHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500908 [H]