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The map label for this gene is ygzD [H]

Identifier: 218236090

GI number: 218236090

Start: 723180

End: 723383

Strand: Direct

Name: ygzD [H]

Synonym: BCB4264_A0729

Alternate gene names: 218236090

Gene position: 723180-723383 (Clockwise)

Preceding gene: 218235513

Following gene: 218234449

Centisome position: 13.35

GC content: 33.82

Gene sequence:

>204_bases
ATGGCTGTAAGTAAAATAAAAGTCGCGCGTGTTCAATTAGATTTAACACAGCAACAATTAGCAGAAAAAGTAGGCGTTAC
AAGGCAAACGATTAGTTTAATTGAGAAGGGGAAATACAATCCATCTTTAGATTTGTGTTTAAAAATTTGTTATGCAGTAG
ATAAAACGTTGAATGATTTGTTTTGGGAGGAAAAGGAGTGGTAG

Upstream 100 bases:

>100_bases
AGCAAACTGTAGTAGCAAGTGATTAGCGAGGCAGGGCACGTAGAAGCAGGAATACTCTAAGAATATACATTTGTCTATAT
TTTTAGTAGCAGGAACATGA

Downstream 100 bases:

>100_bases
GATGAAAATCGTGAAAGATGAACGTTTAATGATTGAAGGGTTAAAACATATTAGATTAGCTTTCATCTTACAAAATATCG
TCATACTAGCTATCGTCTTT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDLFWEEKEW

Sequences:

>Translated_67_residues
MAVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDLFWEEKEW
>Mature_66_residues
AVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDLFWEEKEW

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7741; Mature: 7610

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDL
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FWEEKEW
HCCCCCC
>Mature Secondary Structure 
AVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FWEEKEW
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]