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The map label for this gene is yrhP [H]

Identifier: 218235872

GI number: 218235872

Start: 2220629

End: 2221261

Strand: Reverse

Name: yrhP [H]

Synonym: BCB4264_A2321

Alternate gene names: 218235872

Gene position: 2221261-2220629 (Counterclockwise)

Preceding gene: 218235464

Following gene: 218231717

Centisome position: 40.99

GC content: 30.49

Gene sequence:

>633_bases
ATGATAGAAAATTATCTTCTTTTCATCATTATGTCTATTTGCCTCATCATTTTACCTGGTCCAGATACAGCAATGGCTAC
GAAAAATACATTGGTTGCTGGTAAAGTCGGTGGAGTGAAAACAGTGTTTGGTACATGTATTGCACTATTAATTCATACTT
TAGCTGCTGTAATTGGTCTTTCTGCACTTATTGTAAAGTCAGCTCTTTTATTTTCTATTTTCAAGTACGTTGGGGCTCTC
TATTTAATATATATCGGTATTAAAGCCCTTTTAGCAGTAAGAAACAAAGAAAACTTAGATACAAATGATCTATCTTTGAA
TAATGAAAACGAACATACTTCTTGCTTTCGCCAAGGATTTCTTACAAATTTATTAAATCCTAAAGTAGCAGTCTTCTTTT
TAACTTTTTTACCACAATTTTTAAATCCAAATCATAATACATTTATTCAACTTCTTGTAATGGGCCTTACTTACCTCGTT
TTAACAGTCATTTGGTTTGCATTTTATATATTTTTAATTGATAAAATTAGTGCTTTTATGAAAAAACCGAAGACGCAACG
TTATATTCAAGGGCTAACAGGAGTCGTCCTAATTGGATTTGGTATTAAACTAGCTTTTGAAAAAAATAATTAA

Upstream 100 bases:

>100_bases
TTTATTTAATTATTTTTAATAAAATTTAATTTTATTAAATCCATTTTTGTGCTACACTGATTTTAATCAAATATTCTAAA
AATAAAAAGGAGGGACGGCT

Downstream 100 bases:

>100_bases
CAAGACGAAAACCACCACTATTAATAGTGGTGGTTTTCATCTAATAACTGATTTGGTTGTTTACTCTATATTAAAACCAG
CGCTCAGTTACAACTTTTTT

Product: putative homoserine/threonine efflux protein

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIENYLLFIIMSICLIILPGPDTAMATKNTLVAGKVGGVKTVFGTCIALLIHTLAAVIGLSALIVKSALLFSIFKYVGAL
YLIYIGIKALLAVRNKENLDTNDLSLNNENEHTSCFRQGFLTNLLNPKVAVFFLTFLPQFLNPNHNTFIQLLVMGLTYLV
LTVIWFAFYIFLIDKISAFMKKPKTQRYIQGLTGVVLIGFGIKLAFEKNN

Sequences:

>Translated_210_residues
MIENYLLFIIMSICLIILPGPDTAMATKNTLVAGKVGGVKTVFGTCIALLIHTLAAVIGLSALIVKSALLFSIFKYVGAL
YLIYIGIKALLAVRNKENLDTNDLSLNNENEHTSCFRQGFLTNLLNPKVAVFFLTFLPQFLNPNHNTFIQLLVMGLTYLV
LTVIWFAFYIFLIDKISAFMKKPKTQRYIQGLTGVVLIGFGIKLAFEKNN
>Mature_210_residues
MIENYLLFIIMSICLIILPGPDTAMATKNTLVAGKVGGVKTVFGTCIALLIHTLAAVIGLSALIVKSALLFSIFKYVGAL
YLIYIGIKALLAVRNKENLDTNDLSLNNENEHTSCFRQGFLTNLLNPKVAVFFLTFLPQFLNPNHNTFIQLLVMGLTYLV
LTVIWFAFYIFLIDKISAFMKKPKTQRYIQGLTGVVLIGFGIKLAFEKNN

Specific function: Conducts The Efflux Of Homoserine And Homoserine Lactone. [C]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI48994979, Length=208, Percent_Identity=28.3653846153846, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788099, Length=204, Percent_Identity=27.4509803921569, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI48994978, Length=208, Percent_Identity=25, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1786522, Length=189, Percent_Identity=23.2804232804233, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23344; Mature: 23344

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENYLLFIIMSICLIILPGPDTAMATKNTLVAGKVGGVKTVFGTCIALLIHTLAAVIGL
CCCHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SALIVKSALLFSIFKYVGALYLIYIGIKALLAVRNKENLDTNDLSLNNENEHTSCFRQGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
LTNLLNPKVAVFFLTFLPQFLNPNHNTFIQLLVMGLTYLVLTVIWFAFYIFLIDKISAFM
HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKPKTQRYIQGLTGVVLIGFGIKLAFEKNN
HCCCHHHHHHHHHHHHHHHCCEEEEEECCC
>Mature Secondary Structure
MIENYLLFIIMSICLIILPGPDTAMATKNTLVAGKVGGVKTVFGTCIALLIHTLAAVIGL
CCCHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SALIVKSALLFSIFKYVGALYLIYIGIKALLAVRNKENLDTNDLSLNNENEHTSCFRQGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
LTNLLNPKVAVFFLTFLPQFLNPNHNTFIQLLVMGLTYLVLTVIWFAFYIFLIDKISAFM
HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKPKTQRYIQGLTGVVLIGFGIKLAFEKNN
HCCCHHHHHHHHHHHHHHHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]