Click here to switch to the map view.

The map label for this gene is yusO [H]

Identifier: 218235502

GI number: 218235502

Start: 683867

End: 684325

Strand: Direct

Name: yusO [H]

Synonym: BCB4264_A0694

Alternate gene names: 218235502

Gene position: 683867-684325 (Clockwise)

Preceding gene: 218232760

Following gene: 218234907

Centisome position: 12.62

GC content: 38.13

Gene sequence:

>459_bases
ATGCCAAATGATATGACGCATATCGATAAAATTCAAGCTCTTGCCTTTTCGATTGGAAAGAAAATGCAAACGGAGTTATT
AGAACAAATGCAAGCGACAGGACTTACACCACCGCAGTTTTATATTTTAAAGATTCTAGATCATTATGGGGCTTCAAGAG
CGACAACATTAGCGAAAAAGATGTATGTGAAGCCTAGCGCGATTACAGTGATGATTGATCGTCTAATCGATCAAGAACTT
GTAGAACGCTATCACGACAAAGATGACCGTCGCGTTGTCATCATCGAGTTAACGAAAAAGGGGAAAGCTAGAGTAGAAGA
GGCAATGACAGCTCGTAACGAGCATATTGCAAAATACTTTTCACATTTAGAGTTGCAAGAAAGAGAAGATTTATTACGTC
TCTTTGAGAAGTTAGAAACCATTATTTGCGGGACACAAGAGAAAAAAGAGAATAACTAA

Upstream 100 bases:

>100_bases
TGTAAACGTTTTTATGAATAAAAGTATTGACGGATTTTATTCGTGGGATTAATATTTAAATACATTAAATATTTTATTGT
TTAAATAAGAGGTGGATAAC

Downstream 100 bases:

>100_bases
GAGGAATTGAGGAGATTACATGGAGCAACAAGAAAATCAAAATAGAAAGTTGTTGTTAATCGGTTTAATTATCGCGATGC
TATTTGCTGCATTAGATGGA

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPNDMTHIDKIQALAFSIGKKMQTELLEQMQATGLTPPQFYILKILDHYGASRATTLAKKMYVKPSAITVMIDRLIDQEL
VERYHDKDDRRVVIIELTKKGKARVEEAMTARNEHIAKYFSHLELQEREDLLRLFEKLETIICGTQEKKENN

Sequences:

>Translated_152_residues
MPNDMTHIDKIQALAFSIGKKMQTELLEQMQATGLTPPQFYILKILDHYGASRATTLAKKMYVKPSAITVMIDRLIDQEL
VERYHDKDDRRVVIIELTKKGKARVEEAMTARNEHIAKYFSHLELQEREDLLRLFEKLETIICGTQEKKENN
>Mature_151_residues
PNDMTHIDKIQALAFSIGKKMQTELLEQMQATGLTPPQFYILKILDHYGASRATTLAKKMYVKPSAITVMIDRLIDQELV
ERYHDKDDRRVVIIELTKKGKARVEEAMTARNEHIAKYFSHLELQEREDLLRLFEKLETIICGTQEKKENN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17705; Mature: 17574

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDMTHIDKIQALAFSIGKKMQTELLEQMQATGLTPPQFYILKILDHYGASRATTLAKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
MYVKPSAITVMIDRLIDQELVERYHDKDDRRVVIIELTKKGKARVEEAMTARNEHIAKYF
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
SHLELQEREDLLRLFEKLETIICGTQEKKENN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PNDMTHIDKIQALAFSIGKKMQTELLEQMQATGLTPPQFYILKILDHYGASRATTLAKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
MYVKPSAITVMIDRLIDQELVERYHDKDDRRVVIIELTKKGKARVEEAMTARNEHIAKYF
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
SHLELQEREDLLRLFEKLETIICGTQEKKENN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]