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The map label for this gene is yddQ [H]

Identifier: 218235321

GI number: 218235321

Start: 2839108

End: 2839638

Strand: Reverse

Name: yddQ [H]

Synonym: BCB4264_A2963

Alternate gene names: 218235321

Gene position: 2839638-2839108 (Counterclockwise)

Preceding gene: 218234229

Following gene: 218235845

Centisome position: 52.4

GC content: 38.98

Gene sequence:

>531_bases
ATGAAAAAAGCATTAATCGTAATTGATGTGCAAGCGGGTATGTATACAGCTGGAATGCCAGTACATAATGGGGGAAAGTT
TTTACAAACATTGCAAGAGCTTATTAGGGAATGTCGTTCAAATGATATTCCAGTTATTTATATCCAACATAACGGTCCTA
AAGACCATCCGTTAGAAAAAGGTACGGATGGATGGCGAATCCATGCGGCCATCGCTCCGCAAGAAGGAGATAATATAGTT
GAAAAGACGACTCCAGATTCATTCCATAATACAAACTTAAGCGAAGTGTTACAAGAGAAAGGAATTGAACACGTTATTCT
TTCGGGAATGCAAACAGAGTATTGTGTAGATACGACAACGCGCAGAGCATGTAGTGAAGGGTATAAAGTAACGTTAGTGA
GTGATGCGCATAGTACATTTAATACAGAAGTGTTACGTGCTGAAGATATTGTGAAACATCATAACGCAGTATTGGGAGCG
TTTGCGGATGTTGTTGAAGTAAAAGACTTAAAAGTGGCTGCCTCTAAATAA

Upstream 100 bases:

>100_bases
TTAAAGGAACATGAGTTGCATGAGGGGAAATTAGAAGATTGTTGGATGATGGAATATAAACAATAATAATGGCTTATACA
AATAAAGGGGGATGTGTGAA

Downstream 100 bases:

>100_bases
GAGGCAGTTTTTTATTAGAAAAAATAGCGTCAAATATTGTTAGTAATTCGGTATTTTGAAATAATCACTTATATAATTTC
ACGTACCATAATGAAAAAAT

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKALIVIDVQAGMYTAGMPVHNGGKFLQTLQELIRECRSNDIPVIYIQHNGPKDHPLEKGTDGWRIHAAIAPQEGDNIV
EKTTPDSFHNTNLSEVLQEKGIEHVILSGMQTEYCVDTTTRRACSEGYKVTLVSDAHSTFNTEVLRAEDIVKHHNAVLGA
FADVVEVKDLKVAASK

Sequences:

>Translated_176_residues
MKKALIVIDVQAGMYTAGMPVHNGGKFLQTLQELIRECRSNDIPVIYIQHNGPKDHPLEKGTDGWRIHAAIAPQEGDNIV
EKTTPDSFHNTNLSEVLQEKGIEHVILSGMQTEYCVDTTTRRACSEGYKVTLVSDAHSTFNTEVLRAEDIVKHHNAVLGA
FADVVEVKDLKVAASK
>Mature_176_residues
MKKALIVIDVQAGMYTAGMPVHNGGKFLQTLQELIRECRSNDIPVIYIQHNGPKDHPLEKGTDGWRIHAAIAPQEGDNIV
EKTTPDSFHNTNLSEVLQEKGIEHVILSGMQTEYCVDTTTRRACSEGYKVTLVSDAHSTFNTEVLRAEDIVKHHNAVLGA
FADVVEVKDLKVAASK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19418; Mature: 19418

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALIVIDVQAGMYTAGMPVHNGGKFLQTLQELIRECRSNDIPVIYIQHNGPKDHPLEK
CCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
GTDGWRIHAAIAPQEGDNIVEKTTPDSFHNTNLSEVLQEKGIEHVILSGMQTEYCVDTTT
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEHHCCCCCCHHHCHHH
RRACSEGYKVTLVSDAHSTFNTEVLRAEDIVKHHNAVLGAFADVVEVKDLKVAASK
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
>Mature Secondary Structure
MKKALIVIDVQAGMYTAGMPVHNGGKFLQTLQELIRECRSNDIPVIYIQHNGPKDHPLEK
CCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
GTDGWRIHAAIAPQEGDNIVEKTTPDSFHNTNLSEVLQEKGIEHVILSGMQTEYCVDTTT
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEHHCCCCCCHHHCHHH
RRACSEGYKVTLVSDAHSTFNTEVLRAEDIVKHHNAVLGAFADVVEVKDLKVAASK
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]