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The map label for this gene is ybfM [H]

Identifier: 218235024

GI number: 218235024

Start: 467906

End: 468499

Strand: Direct

Name: ybfM [H]

Synonym: BCB4264_A0480

Alternate gene names: 218235024

Gene position: 467906-468499 (Clockwise)

Preceding gene: 218233559

Following gene: 218231604

Centisome position: 8.63

GC content: 36.53

Gene sequence:

>594_bases
ATGGAACAACATATTGGCGAGTTAATCGCGCATTATGGCTATTTTGGAATTGTTATAGCTTTGGCTGGTGGGATTGTCGG
ATTACCGATACCAGACGAGTTTTTATTGACCTTTGTTGGTTATAATGTTTCAAAAGGAGTTATGTCAGGAACTGCTGCTT
TTTTAAGTGGGATGGCTGGTGCGATGTTAGGGATCACGTTAAGCTACATATTAGGTTTAAAACTTGGGCTCCCTGTTTTA
AAGAAATATGGGCCGAAAATTAGAATTAAAGAACATCACATTGAAAAAACACATATTTTATTTGAAAAATATGGGCCATT
TCTTTTAATGATTGGTTATTTTATACCGGGCGTACGTCATTTAACAGCATATTTTGCTGGGGTATCAAATTTGACACTTT
GGCGTTTTTGTTTGTACGCTTACGGTGGTGCGCTCATTTGGATAAGTGTTTTTATTGGGCTTGGCTGGAAATTAGGCGAG
AAGTGGCGCTTCGTTGAGTATAGTTTACATCATTATGGAATATGGATTTTATTAATTTCAGCAGTTGTTACATGTGTTGT
ATGGTTGTACATAAAGAAAAAGAAAAACCGCTAA

Upstream 100 bases:

>100_bases
TTATAAAAACAATGTATAGTGAATATGTATACCATGTTTGCCTTAAAGATAGAAAGGGTACAATGTGGAATAACGACCGT
GCATAGGATGTGTCTTCCGA

Downstream 100 bases:

>100_bases
TAGCGGTTTTTTTAGCTGAAAGCAATAAATAATACACCAGCTGTAATAAAGACTACACCAACGCCAGTCATAAAGTTTAA
CTTTTCACCGAGGATAATCA

Product: dedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MEQHIGELIAHYGYFGIVIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVL
KKYGPKIRIKEHHIEKTHILFEKYGPFLLMIGYFIPGVRHLTAYFAGVSNLTLWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILLISAVVTCVVWLYIKKKKNR

Sequences:

>Translated_197_residues
MEQHIGELIAHYGYFGIVIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVL
KKYGPKIRIKEHHIEKTHILFEKYGPFLLMIGYFIPGVRHLTAYFAGVSNLTLWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILLISAVVTCVVWLYIKKKKNR
>Mature_197_residues
MEQHIGELIAHYGYFGIVIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAGAMLGITLSYILGLKLGLPVL
KKYGPKIRIKEHHIEKTHILFEKYGPFLLMIGYFIPGVRHLTAYFAGVSNLTLWRFCLYAYGGALIWISVFIGLGWKLGE
KWRFVEYSLHHYGIWILLISAVVTCVVWLYIKKKKNR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=139, Percent_Identity=33.0935251798561, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22115; Mature: 22115

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQHIGELIAHYGYFGIVIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAG
CHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLGITLSYILGLKLGLPVLKKYGPKIRIKEHHIEKTHILFEKYGPFLLMIGYFIPGVRH
HHHHHHHHHHHHHHHCHHHHHHCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHH
LTAYFAGVSNLTLWRFCLYAYGGALIWISVFIGLGWKLGEKWRFVEYSLHHYGIWILLIS
HHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHH
AVVTCVVWLYIKKKKNR
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQHIGELIAHYGYFGIVIALAGGIVGLPIPDEFLLTFVGYNVSKGVMSGTAAFLSGMAG
CHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLGITLSYILGLKLGLPVLKKYGPKIRIKEHHIEKTHILFEKYGPFLLMIGYFIPGVRH
HHHHHHHHHHHHHHHCHHHHHHCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHH
LTAYFAGVSNLTLWRFCLYAYGGALIWISVFIGLGWKLGEKWRFVEYSLHHYGIWILLIS
HHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHH
AVVTCVVWLYIKKKKNR
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]