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The map label for this gene is cdoA [H]

Identifier: 218234801

GI number: 218234801

Start: 2481253

End: 2481696

Strand: Reverse

Name: cdoA [H]

Synonym: BCB4264_A2559

Alternate gene names: 218234801

Gene position: 2481696-2481253 (Counterclockwise)

Preceding gene: 218233600

Following gene: 218236043

Centisome position: 45.8

GC content: 30.86

Gene sequence:

>444_bases
ATGCAATTGATTCATAACATAAGAAAGGCATTTAATAACCTATGTAACTACGATACGTTCAATTTAATACACACTATTCA
ATCATTAAATATTTCACTTCATAAAATAGCTCCTTTTATTACTTCACCAGTTAACCTTGAATACGGAAGGAACATTATCT
ATCAATCTGAATTTGTAGAGATTTTAGTATTAAATTTCCCCAGCAAAGCAAAGACCTTTGTGCACGATCATGGAATATCT
GTAGGATGTATACTAATAGTCAATGGTACGTTACAAAATATAACGTACGAAAATAATAGCGAGCGGATTGAAGAGTTTAC
AGAGGGAAATATTTTCACAGTAAAAAAAGATACTGTGCATAAAATGTATAATGCTACAGATTCAGCAGTAATAACTTTCC
ACGTATATTCCCCACCATTAAAAGATGTCCAAATATATGAATAG

Upstream 100 bases:

>100_bases
CCTTTTTGAATTTATTCAATACAATGTTATGTAATCGACTACACACGATATAATAGGAGATTACTTTCTTTCACTGCAAA
TGCTTAGGAGGAAGTTGTAC

Downstream 100 bases:

>100_bases
TCTTTAGAAGGAGGAAATATGCAAAATTTGAAAGATTACTATATAAAGAGCTTACAAGATGGTCGTAACGTTTGGCTCTA
TGGTCAAAAAGTAGATGTAA

Product: cysteine dioxygenase type I superfamily

Products: NA

Alternate protein names: CDO [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MQLIHNIRKAFNNLCNYDTFNLIHTIQSLNISLHKIAPFITSPVNLEYGRNIIYQSEFVEILVLNFPSKAKTFVHDHGIS
VGCILIVNGTLQNITYENNSERIEEFTEGNIFTVKKDTVHKMYNATDSAVITFHVYSPPLKDVQIYE

Sequences:

>Translated_147_residues
MQLIHNIRKAFNNLCNYDTFNLIHTIQSLNISLHKIAPFITSPVNLEYGRNIIYQSEFVEILVLNFPSKAKTFVHDHGIS
VGCILIVNGTLQNITYENNSERIEEFTEGNIFTVKKDTVHKMYNATDSAVITFHVYSPPLKDVQIYE
>Mature_147_residues
MQLIHNIRKAFNNLCNYDTFNLIHTIQSLNISLHKIAPFITSPVNLEYGRNIIYQSEFVEILVLNFPSKAKTFVHDHGIS
VGCILIVNGTLQNITYENNSERIEEFTEGNIFTVKKDTVHKMYNATDSAVITFHVYSPPLKDVQIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cysteine dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010300
- InterPro:   IPR014710 [H]

Pfam domain/function: PF05995 CDO_I [H]

EC number: =1.13.11.20 [H]

Molecular weight: Translated: 16892; Mature: 16892

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIHNIRKAFNNLCNYDTFNLIHTIQSLNISLHKIAPFITSPVNLEYGRNIIYQSEFVE
CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEHHHHHHHHCCCCCCCCCCCEEEECCEEE
ILVLNFPSKAKTFVHDHGISVGCILIVNGTLQNITYENNSERIEEFTEGNIFTVKKDTVH
EEEEECCCHHHHEECCCCCCEEEEEEECCCEEEEEECCCHHHHHHHCCCCEEEEEHHHHH
KMYNATDSAVITFHVYSPPLKDVQIYE
HHHCCCCCEEEEEEEECCCCCCEEECC
>Mature Secondary Structure
MQLIHNIRKAFNNLCNYDTFNLIHTIQSLNISLHKIAPFITSPVNLEYGRNIIYQSEFVE
CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEHHHHHHHHCCCCCCCCCCCEEEECCEEE
ILVLNFPSKAKTFVHDHGISVGCILIVNGTLQNITYENNSERIEEFTEGNIFTVKKDTVH
EEEEECCCHHHHEECCCCCCEEEEEEECCCEEEEEECCCHHHHHHHCCCCEEEEEHHHHH
KMYNATDSAVITFHVYSPPLKDVQIYE
HHHCCCCCEEEEEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]